JAtlasViewer

software | JAtlasViewer

JAtlasViewer is for viewing arbitrary sections through 3D images. It provides any number of section views, a 3D visualisation for feedback and anatomical feedback where this has been defined.
Data needs to be formatted in a certain way (see FAQ). JAtlasViewer can be used to view data from the Mouse Atlas CD or you can down-load a sample data set.
The recommended way to run JAtlasViewer is using Java Webstart. (Click here for information on installing / using Java Webstart.)

Please check the system requirements before trying JAtlasViewer.

Sample data set

Run JAtlasViewer

Preview (screen-shots)

Using JAtlasViewer

FAQ

Start up tutorial

If you don't want to use Java Webstart you can Download and install JAtlasViewer and the required Woolz libraries manually.

This work has been partially funded by the NIH HBP grant "Electronic Atlas of the Human Embryonic Brain Gene Expression" in order to view digital reconstructions of mouse and human embryos at different stages of development.

Web page contact: genexweb@hgu.mrc.ac.uk

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