JAtlasViewer is a program for selecting and viewing virtual sections from woolz format 3D images. Since any arbitrary section plane can be chosen, it can be used to explore the internal space of these 3D images.

Examples of suitable format 3D images include the EMAP mouse embryo models, the EADHB human embryo models and 3D images of gene expression patterns that have been generated using Optical Projection Tomography and are housed in the EMAGE database.
In some of the EMAP and EADHB models, anatomical regions are delineated in 3D and these too can be visualised with respect to each other and the entire organism using JAtlasViewer.

Start the latest (2.1) version of JAtlasViewer