binWlz Directory Reference

Files
file	Wlz3DWarpMQ.c
	Automatically produce a tetrahedron mesh from a woolz object.
file	WlzAffineTransformDiff.c
	Compares two given affine transforms.
file	WlzAffineTransformLSq.c
	Computes an affine transform from a list of vertices and vertex displacements.
file	WlzAffineTransformObj.c
	General affine transform toolkit.
file	WlzAffineTransformVertices.c
	Affine transforms vertices.
file	WlzArea.c
	Calculates the area of 2D domain objects.
file	WlzAutoCorrelate.c
	Computes the autocorrelation of the given object.
file	WlzAutoTrackUpDown.c
file	WlzBasisFnTransformObj.c
	Computes and applies Woolz basis function transforms.
file	WlzBasisFnTransformVertices.c
	Applies a basis function to vertices.
file	WlzBlobsToMarkers.c
	Creates a new domain object with a marker at the location of each separate part of the given domain object.
file	WlzBoundaryToObj.c
	Converts boundary lists to domain objects.
file	WlzBoundaryVertices.c
	Extracts boundary vertex positions from an object.
file	WlzBoundingBox.c
	Calculates the bounding box of an object.
file	WlzBuildContour.c
	Builds a contour from input simplices.
file	WlzCannyDeriche.c
	Implements a Canny/Deriche edge detection filter.
file	WlzCentralityObj.c
	Computes the centrality of a feature object's domain with respect to a reference object's domain.
file	WlzCentreOfMass.c
	Calculates the mass and centre of mass of domain objects.
file	WlzChangeEMAPProperty.c
	Changes the EMAP property of a woolz object.
file	WlzClassifyRCC.c
	Classifies an ordered pair of domain objects using a region connected calculus.
file	WlzClipObjToBox.c
	Clips the given object so that it lies within the given box.
file	WlzClosestVertices.c
	Finds the closest vertices in an object to those in a list.
file	WlzCMeshCurvToImage.c
	Creates a 2D domain object (image) in which the values are the curvature of the 2D5 CMesh. The given CMesh must have displacements that will flatten the mesh already computed.
file	WlzCMeshDeleteUnusedNodes.c
	Deletes unused nodes, ie those with no edge use from the given mesh.
file	WlzCMeshDispToField.c
	Creates a displacement field object from the given conforming mesh object. object.
file	WlzCMeshDistance.c
	Constructs a 2D or 3D domain object the values of which are the minimum distance from the seeds in a conforming mesh.
file	WlzCMeshExtrapolate.c
	Extrapolate values within a conforming mesh.
file	WlzCMeshFromContour.c
	Constructs a conforming simplical mesh from a contour with a geometric model.
file	WlzCMeshGen.c
	Constructs a 2D or 3D conforming simplical mesh from a domain object.
file	WlzCMeshIntersectDom.c
	Creates a 2D domain object (image) in which the values are the curvature of the 2D5 CMesh. The given CMesh must have displacements that will flatten the mesh already computed.
file	WlzCMeshSetDispFromField.c
	Creates a conforming mesh object with indexed values set using the given displacement field object.
file	WlzCMeshSurfaceMap.c
	Computes a conforming mesh transform which maps a surface in 3D to a plane.
file	WlzCMeshToContour.c
	Creates a contour from a conforming mesh.
file	WlzCMeshToSpatialDomain.c
	Constructs a 2D or 3D spatial domain without any values, but which corresponds to the given conforming mesh.
file	WlzCMeshTransformInvert.c
	Inverts a constrained mesh transform.
file	WlzCMeshTransformObj.c
	Transforms an object using a constrained mesh transform.
file	WlzCMeshTransformVtx.c
	Transforms vertices using a constrained mesh transform.
file	WlzCMeshTrExpansion.c
	Creates a conforming mesh with a a normalised expansion scalar attached to each element from the given conforming mesh transform.
file	WlzCMeshTrStrainTensor.c
	Creates a conforming mesh with a strain tensor attached to each element from the given conforming mesh transform.
file	WlzCMeshValueTransfer.c
	Transfers the values of one CMesh object to another within the intersection of their (mesh) domains.
file	WlzCompDispIncGrey.c
	Computes a displacement field as a compound array object from two given objects. The displacements are between pixels/voxels with the same grey value.
file	WlzCompound.c
	Generates a Woolz compound object from objects.
file	WlzCompoundArrayToScalar.c
	Reduces a compound array to a scalar valued object.
file	WlzCompThresh.c
	Computes a threshold value from a Woolz histogram object.
file	WlzConComThreholdObj.c
	Connected component thresholding.WlzConComThreholdObj.
file	WlzConstruct3D.c
	Constructs a 3D domain object from 2D domain objects.
file	WlzContourCut.c
	Creates a new contour from the two given contours in which no simplices of the given model contour which intersect the given knife contour are included.
file	WlzContourFlipOrient.c
	Flips orientation of edges and faces in contour models.
file	WlzContourFromPoints.c
	Computes a contour object from point sets.
file	WlzContourGeomFilter.c
	Filters a contour model.
file	WlzContourObj.c
	Computes edge and surface based contour models from domain objects.
file	WlzContourSpxStats.c
	Calculates simplex statistics for contour models.
file	WlzContourSzSelect.c
	Filter to remove small shells from contours.
file	WlzConvertPix.c
	Converts the pixel type of a grey-level woolz object.
file	WlzConvexHull.c
	Computes convex hulls.
file	WlzConvexPoly.c
	Computes the convex polygon (hull) enclosing a domain.
file	WlzCopyObj.c
	Reads an object and writes it out again. Useful for moving to a new file format.
file	WlzCopyToTiledObj.c
	Sets values in a tiled object using the values from another object.
file	WlzCreateSpecialSE.c
	Creates a "special" structuring element object.
file	WlzCrossCorValue.c
	Computes the cross correlation value of two objects.
file	WlzCutObjToBox.c
	Cuts out a filled box from the given object.
file	WlzDefGrdTensorFeatures.c
	Functions to extract features from deformation gradient tensor fields.
file	WlzDiffDomain.c
	Computes the difference between two domains.
file	WlzDilation.c
	Dilates a domain.
file	WlzDistanceMetric.c
	Computes distance metrics between contour objects.
file	WlzDistanceTransform.c
	Computes distance transform objects.
file	WlzDitherPoints.c
	Creates a domain with a marker located at the position of each point vertex using a points object.
file	WlzDomain.c
	Extracts the domain of an object.
file	WlzDomainFill.c
	Fills the domain of a woolz object.
file	WlzErosion.c
	Morphological erosion of a woolz domain object.
file	WlzExplode.c
	Explodes objects into component objects.
file	WlzFacts.c
	Gives information about Woolz objects.
file	WlzFile.c
	Identifies the type of object in a file.
file	WlzFilterNObjsValues.c
	Filters the values of multiple domain objects to construct a new domainn object in which each value is formed by filtering the values of all input objects at the same position as the values of the resulting object.
file	WlzFitPlane.c
	Computes a best fit plane to given vertices.
file	WlzFourierTransform.c
	Computes the Fourier transform (or the inverse transform) of an object.
file	WlzGauss.c
	Applies a Gaussian filter to an objects grey values.
file	WlzGaussNoise.c
	Adds Gaussian noise to the grey values of an object.
file	WlzGeometryTrackUpAndDown.c
	Interpolates tie-point bibfiles.
file	WlzGetSubSectionFromObj.c
	Cuts a section from an object with the domain of a given object.
file	WlzGreyCrossing.c
	Detects grey value crossings.
file	WlzGreyGradient.c
	Computes a grey gradient object from the input object.
file	WlzGreyInvert.c
	Inverts the grey-range of a grey-level object.
file	WlzGreyMask.c
	Sets all object values within a mask domain to a mask value.
file	WlzGreyNormalise.c
	Normalise the grey-range of a grey-level object.
file	WlzGreyRange.c
	Outputs the grey-range of a grey-level object.
file	WlzGreySetIncValues.c
	Sets incrementing (and hence unique) values in scan order throughout a domain object.
file	WlzGreySetRange.c
	Sets the grey-range of a grey-level woolz object.
file	WlzGreySetValue.c
	Sets the grey values of the object to a specified value.
file	WlzGreyStats.c
	Calculates simple statistics for a domain object's grey values.
file	WlzGreyTemplate.c
	Applies a template to an object's values.
file	WlzGreyTransfer.c
	Copies grey values from a source object to a destination object within the intersection of the object's domains.
file	WlzGreyValue.c
	Gets a single grey value in an object.
file	WlzGreyValueMixing.c
file	WlzGreyVarianceObj.c
	Variance filters domain objects with values.
file	WlzHasIntersect.c
	Tests whether a pair of objects intersect.
file	WlzHistogramData.c
	Reads a histogram object and writes it as ascii data.
file	WlzHistogramEqualiseObj.c
	Histogram equalises a Woolz domain object.
file	WlzHistogramFindPeaks.c
	Finds histogram peak positions.
file	WlzHistogramFitPeaks.c
	Fits a series of Gaussian distributions to a histogram.
file	WlzHistogramGauss.c
	Convolves the bin values of a histogram object with a Gaussian's 0th, 1st or nd derivative.
file	WlzHistogramMatchObj.c
	Histogram matches a domain object.
file	WlzHistogramObj.c
	Computes a histogram from a 2D or 3D domain object.
file	WlzHistogramRebin.c
	Re-bins a histogram.
file	WlzHistogramSmooth.c
	Low-pass filters a histogram object.
file	WlzImageArithmetic.c
	Binary image arithmetic on a pair of domain objects.
file	WlzIndexObjFromCompound.c
	Creates an grey value index object from the given compound array object.
file	WlzIndexObjToCompound.c
	Creates an grey value index object from the given compound array object.
file	WlzInsideDomain.c
	Determines whether a vertex is within an object's domain.
file	WlzInteriority.c
	Computes interiority scores for object domains.
file	WlzIntersect.c
	Computes the intersection of the input objects.
file	WlzIntRescaleObj.c
	Rescales an object using an integer scale factor.
file	WlzIsEmpty.c
	Determines whether objects are empty.
file	WlzLabel.c
	Labels (segments) the input objects.
file	WlzLaplacian.c
	Applies a Laplacian edge enhancement filter.
file	WlzLUTGreyTransformFromTxt.c
	Creates a grey LUT transform from text input to form a grey LUT transform object.
file	WlzLUTGreyTransformMerge.c
	Merges integer look up table grey transforms to form a RGB \(\alpha\) grey transform.
file	WlzLUTGreyTransformObj.c
	Applies an look up table grey transform.
file	WlzMakeEmpty.c
	Makes an empty woolz object.
file	WlzMakeRect.c
	Makes a rectangular or cuboid domain.
file	WlzMarkerLatticeFromDomain.c
	Covers a spatial domain with a lattice of markers.
file	WlzMarkersToDomain.c
	Creates a domain with a marker located at the position of each vertex read from a file.
file	WlzMatchICPObj.c
	Object matching using ICP based registration to find corresponding points.
file	WlzMeshTransformObj.c
	Applies a mesh transform to an object.
file	WlzMinWidthRectAngle.c
	Computes the angle of the minimum width rectangle which encloses the given 2D object.
file	WlzNearbyDomain.c
	Computes a domain which is newarby some some location in a reference domain. "".
file	WlzNObjsGreyStats.c
	Computes basic grey value statistics across multiple objects.
file	WlzObjToBoundary.c
	Converts a domain object to a boundary to a boundary list.
file	WlzOffsetDistance.c
	Computes an equidistant object between a pair of doimain objects. "".
file	WlzPerturbLandmarks.c
	Perturbs a set of landmark vertices using a random displacement, while constraining the landmarks to lie within a given domain.
file	WlzPointsFromDomain.c
	Outputs a point object given a 2 or 3D spatial domain. "".
file	WlzPointsToMarkers.c
	Creates a domain with a marker located at the position of each point vertex using a points object.
file	WlzPointsToText.c
	Writes out a Woolz points object as text.
file	WlzPolarSample.c
	Polar resampling of domain objects.
file	WlzPolygonToObj.c
	Converts a polygon object to a domain object.
file	WlzPrinicipalAngle.c
	Calculates the mass, centre of mass and principal angle of domain objects.
file	WlzRandomAffineTransform.c
	Creates an affine transform with random transfrom primatives.
file	WlzRankObj.c
	Rank filters domain objects with values.
file	WlzRasterObj.c
	Rasterizes geometric objects into domain objects.
file	WlzRBFContourObj.c
	Uses radial basis function to approximate a contour from point clouds.
file	WlzRegisterCCor.c
	Registers a pair of 2D domain objects with grey values using frequency domain cross-correlation.
file	WlzRegisterICP.c
	Registers two objects using an iterative closest point algorithm.
file	WlzRegisterICPWSD.c
	Computes a 3D grey valued object in which the values are the weighted sums of distances as used for ICP registration.
file	WlzRGBAConvert.c
	Colour conversion for an RGBA colour object.
file	WlzRGBChannelRatio.c
	Computes log ratio of RGB channels in a RGBA object.
file	WlzRGBCombine.c
	Combines upto three domain objects with values to make a single RGBA domain object in which the input objects are used for the RGB components.
file	WlzRmDirBleed.c
	Removes directional bleed from a Woolz image object. "".
file	WlzRMSDiff.c
	Computes the RMS difference between the grey values of objects.
file	WlzRsvFilterObj.c
	Recursive filter for domain objects with grey values.
file	WlzSampleObj.c
	Efficient sub-sampling of domain objects.
file	WlzScalarBinaryOp.c
	Apply a scalar operation to a woolz object.
file	WlzScalarDivide.c
	Divides the pixel values of a grey-level object by a scalar value.
file	WlzScalarFeatures.c
	Extracts scalar features from Woolz domain objects.
file	WlzScalarFnObj.c
file	WlzScalarScale.c
	Creates an object with a tiled value table from an object with a valid spatial domain.
file	WlzSelect1InN.c
	Selects planes 1 in n from a 3D object.
file	WlzSepFilterObj.c
	Seperable spatial convolution kernel base filters for 2 and 3D objects.
file	WlzSetBackground.c
	Sets the background value of a domain object with grey values.
file	WlzSetVoxelSize.c
	Sets the voxel size of a 3D domain object.
file	WlzShadeCorrect.c
	Shade corrects a domain object with values.
file	WlzShiftObj.c
	Shifts objects using an integer translation.
file	WlzSkeleton.c
	Computes the skeleton of the a domain object.
file	WlzSnapFitObjs.c
	Finds a set of correspondences between two objects based on closest points.
file	WlzSobel.c
	A 3x3 Sobel edge detection filter.
file	WlzStripProperties.c
	Strips the property list from an object.
file	WlzStructDilation.c
	Dilates an object using a structuring element object.
file	WlzStructErosion.c
	Erodes a domain object using a structuring element object.
file	WlzTensorComponent.c
	Extract tensor component values. "".
file	WlzThinObjToPoints.c
	Outputs a point object given a 2 or 3D spatial domain with the points computed by thinning the spatial domain object.. "".
file	WlzThreshold.c
	Thresholds a grey-level object.
file	WlzTiledObjFromDomain.c
	Creates an object with a tiled value table from an object with a valid spatial domain.
file	WlzTransformProduct.c
	Computes the product of a pair of transforms.
file	WlzTransposeObj.c
	Transposes a 2D object.
file	WlzTransposePlanes.c
	Transposes the planes of 3D objects.
file	WlzUnion.c
	Computes the union of domain objects.
file	WlzValuesFromCoords.c
	Adds coordinate values to the domain of the input object.
file	WlzVerifyObj.c
	Checks objects and fixes them if possible.
file	WlzVolume.c
	Computes the volume of 3D objects.
file	WlzWindow.c
	Applies a window function to a Woolz 2D domain object.
file	WlzXORObj.c
	Morphological set exclusive or operation on a pair of Woolz objects..