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EMAGE:1006

Fgfr3 fibroblast growth factor receptor 3 ( MGI:95524)
TS15 (20 Somite no.)
in situ hybridisation

Data Images
EMAGE:1006
Figure 7N of Ishibashi & McMahon, 2002 [PMID:12361972] . Copyright: This image is from Development and is displayed with permission of The Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Arrowhead indicates the boundary between diencephalon and midbrain.
Expression Pattern Description
Spatial Annotation:
EMAGE:1006Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
1006_wholemount_strong_3D_1.wlz
1006_wholemount_moderate_3D_1.wlz
1006_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:1006_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
diencephalon
strong strong
regionalStrong expression in alar plate of caudal diencephalon and anterior midbrain, overlapping with Tcf4 and Dbx1 domains.
future midbrain
strong strong
regionalStrong expression in alar plate of caudal diencephalon and anterior midbrain. At TS14, expression detected in alar plates of caudal diencephalon and anterior midbrain, overlapping Tcf4 and Dbx1 domains.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2676496
Entity Detected:Fgfr3, fibroblast growth factor receptor 3 ( MGI:95524)
Notes:The probe used in this study by Ishibashi & McMahon, 2002 [PMID:12361972] is of undefined sequence.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:20 Somite no.
Theiler Stage:TS15
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Ishibashi & McMahon, 2002 [PMID:12361972] . Indexed by GXD, Spatially mapped by EMAGE.
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:12361972] Ishibashi M, McMahon AP 2002 A sonic hedgehog-dependent signaling relay regulates growth of diencephalic and mesencephalic primordia in the early mouse embryo. Development (129):4807-19
Links:MGI:2676621 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI