Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:1011

Ascl1 achaete-scute complex homolog 1 (Drosophila) ( MGI:96919)
TS14 (9.0 dpc)
in situ hybridisation

Data Images
EMAGE:1011
Fig 3c (top) Conlon et al, 1995 [PMID:7789282] . Copyright: This image is from Development and is displayed with the permission of the Company of Biologists Ltd who owns the copyright.

Expression pattern clarity: one star
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Notes:
Image annotation: Arrow - dorsal midbrain.
Expression Pattern Description
Spatial Annotation:
EMAGE:1011Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
1011_wholemount_strong_3D_1.wlz
1011_wholemount_possible_3D_1.wlz
1011_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:1011_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
future midbrain
detected detected
regionalMash-1 (Ascl1) is present in the dorsal midbrain
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:23138
Entity Detected:Ascl1, achaete-scute complex homolog 1 (Drosophila) ( MGI:96919)
Sequence:sense strand is shown

>MGI:23138
CAACAGCCGCAGGCGCCGCCGCAGCAGGCGCCGCAGCTGAGCCCGGTGGCCGACAGCCAGCCCTCAGGGG
GCGGTCACAAGTCAGCGGCCAAGCAGGTCAAGCGCCAGCGCTCGTCCTCTCCGGAACTGATGCGCTGCAA
ACGCCGGCTCAACTTCAGCGGCTTCGGCTACAGCCTGCCACAGCAGCAGCCGGCCGCCGTGGCGCGCCGC
AACGAGCGCGAGCGCAACCGGGTCAAGTTGGTCAACCTGGGTTTTGCCACCCTCCGGGAGCATGTCCCCA
ACGGCGCGGCCAACAAGAAGATGAGCAAGGTGGAGACGCTGCGCTCGGCGGTCGAGTACATCCGCGCGCT
GCAGCAGCTGCTGGACGAGCACGACGCGGTGAGCGCTGCCTTTCAGGCGGGCGTCCTGTCGCCCACCATC
TCCCCCAACTACTCCAACGACTTGAACTCTATGGCGGGTTCTCCGGTCTCGTCCTACTCCTCCGACGAGG
GATCCTACGACCCTCTTAGCCCAGAGGAACAAGAGCTGCTGGACTTTACCAACTGGTTCTGAGGACCTGC
CAGGCTCTCCTGGGAATGGACTTTGGAAGCAGGATGGCAGCAGATCCTGCATCTTTAGTGTTTCTCGCCA
ACGACGTCAAATGGGGAGGCAGAAAAACAAGGGGAAAAAAGAAGAAGAAATGAAACAAACAAACCAGACA
GCCAACCTACAGGGGCACCTTCACTAGATGCAATGTTCTCAGCAAACAGGGGTGGGCTCCAACAGTGTCT
CTGCATTCCAACATCATTTCCAGACACGAGAAGAGTGACTGGTGTCTGAACCTAAGCCCGAATCACAGAT
GGGTTCCTTTCCTGGAGCAAGAGCGTCACACACACACACACACACACAGACAGACACTATATTAACTCCC
AACCACTAACAGGCAGGGCTGGAAGCGCGCATGTGCAAGTGCCTTCACCTCCCACTCTCTGTCAGAGCTG
TCTTAGCCCCCTGAAACTGGGTTGATGTCTTTCCTCAGTCACCCCCATTCCAGCGATCTATGGACATTTG
CC
nt 239 - nt 1290 of NM_008553.2
Notes:The Acsl1 (Mash1) probe used in this study by Conlon et al, 1995 [PMID:7789282] is described as that used by Guillemot & Joyner 1993 [PMID:8217843] ie "Clone 2", which is "1.1kb long, started at position aa48 of Mash-1 coding sequence and ended 0.5kb dowmstream of the stop codon in the 3' untranslated region".
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Age:9.0 dpc
Theiler Stage:TS14
Mutations:none (wild-type)
Preparation:wholemount
Procedures
General Information
Authors:Conlon et al, 1995 [PMID:7789282] Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:7789282] Conlon RA, Reaume AG, Rossant J 1995 Notch1 is required for the coordinate segmentation of somites. Development (121):1533-45
 [ doi:10.1016/0925-4773(93)90006-J] [ PMID:8217843] Guillemot F, Joyner AL 1993 Dynamic expression of the murine Achaete-Scute homologue Mash-1 in the developing nervous system. Mech Dev (42):171-85
Links:MGI:1276154 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI