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EMAGE:10216

Etfdh electron transferring flavoprotein, dehydrogenase ( MGI:106100)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:10216 EMAGE:10216 EMAGE:10216 EMAGE:10216 EMAGE:10216
"Pseudo-wholemount" of euxassay_018908. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_018908_01 euxassay_018908_02 euxassay_018908_03 euxassay_018908_04
EMAGE:10216 EMAGE:10216 EMAGE:10216 EMAGE:10216 EMAGE:10216
euxassay_018908_05 euxassay_018908_06 euxassay_018908_07 euxassay_018908_08 euxassay_018908_09
EMAGE:10216 EMAGE:10216 EMAGE:10216 EMAGE:10216 EMAGE:10216
euxassay_018908_10 euxassay_018908_11 euxassay_018908_12 euxassay_018908_13 euxassay_018908_14
EMAGE:10216 EMAGE:10216 EMAGE:10216 EMAGE:10216 EMAGE:10216
euxassay_018908_15 euxassay_018908_16 euxassay_018908_17 euxassay_018908_18 euxassay_018908_19
EMAGE:10216 EMAGE:10216 EMAGE:10216 EMAGE:10216
euxassay_018908_20 euxassay_018908_21 euxassay_018908_22 euxassay_018908_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:10216Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
10216_wholemount_strong.wlz
10216_wholemount_moderate.wlz
10216_wholemount_weak.wlz
10216_wholemount_possible.wlz
10216_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:10216_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
liver
moderate moderate
regionalmoderate expression: see section 01 02 03 weak expression: see section 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22
Annotation Validation: spatial mapping by EMAGE editor, text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T50353
Entity Detected:Etfdh, electron transferring flavoprotein, dehydrogenase ( MGI:106100)
Sequence:sense strand is shown

>T50353
ATGGACACCTAGCCAAGCAGCTTTATAAGAAATTTGATCTGAGGGCCAGCTGTGATGCACAGACTTACGG
AATTGGTTTGAAGGAGTTATGGATTATTGATGAAAAGAAGTGGAAACCTGGAAGAGTAGATCACACTGTT
GGTTGGCCCTTGGACAGACATACTTATGGAGGCTCTTTCCTTTACCACTTAAATGAAGGTGAACCTCTAG
TAGCTGTTGGCTTTGTGGTTGGCCTCGACTATCAGAATCCGTACCTGAGTCCATTCCGAGAGTTCCAGAG
GTGTAAGCATCATCCCAGCATCCAGCCAACCCTGGAAGGCGGGAAGAGGATAGCCTACGGAGCCCGAGCG
CTCAATGAAGGCGGCTTGCAGTCCATACCAAAACTCACTTTTCCTGGTGGCTTACTAATTGGTTGTAGTC
CTGGTTTCATGAATGTCCCCAAGATCAAAGGTACCCACACGGCAATGAAAAGTGGAAGTTTGGCAGCAGA
ATCAATTTTTAAGCAACTAACTAGTGAAAATCTCCAGTCAAAGACAACAGGACTCCATGTAACTGAATAT
GAGGACAATTTGAAGCAATCCTGGGTATGGAAAGAGCTACACGCTGTTCGAAATATAAGGCCATCTTGCC
ACGGGATACTGGGAGTATATGGAGGGATGATTTACACTGGGATATTTTACTGGATATTGAGAGGAATGGA
GCCATGGACTCTAAAACATAAAGGCTCAGACTCTGATCAGCTCAAACCAGCCAAGGATTGTACACCCATT
GAGTATCCGAAACCTGATGGACAGATCAGTTTTGACCTCTTATCCTCTGTGGCTTTGAGTGGTACTAATC
ATGAACATGACCAGCCAGCACATTTAACCT
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:ATGGACACCTAGCCAAGCAG; Reverse Primer - name:unspecified, sequence:AGGTTAAATGTGCTGGCTGG. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:MGI:4824630 same experiment
 EurExpress:euxassay_018908 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS