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EMAGE:1054

Chrd chordin ( MGI:1313268)
TS11 (7.75 dpc)
in situ hybridisation

Data Images
EMAGE:1054
Fig 3B Rhinn et al, 1998 [PMID:9449667] . Copyright: This image is from Development and is displayed with the permission of the Company of Biologists Ltd who owns the copyright.

Expression pattern clarity: three stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:1054Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
1054_wholemount_strong_3D_1.wlz
1054_wholemount_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:1054_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Text Annotation:
StructureLevelPatternNotes
node
detected detected
embryo mesoderm
detected detected
regionalchordin is expressed in the axial mesoderm
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:1202459
Entity Detected:Chrd, chordin ( MGI:1313268)
Notes:The probe used in this study by Rhinn et al, 1998 [PMID:9449667] is described as "a 0.9 kb rat chordin cDNA (kindly provided by H. Wang)". End points of probe are not specified.
Chemistry:RNA
Strand:antisense
Specimen
Organism:mouse
Strain:(CD-1 x 129/Sv)F1
Age:7.75 dpc
Theiler Stage:TS11
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
General Information
Authors:Rhinn et al, 1998 [PMID:9449667] Indexed by GXD, Spatially mapped by EMAGE
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:9449667] Rhinn M, Dierich A, Shawlot W, Behringer RR, Le Meur M, Ang SL 1998 Sequential roles for Otx2 in visceral endoderm and neuroectoderm for forebrain and midbrain induction and specification. Development (125):845-56
Links:MGI:1315077 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI