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EMAGE:1073

Col6a1 collagen, type VI, alpha 1 ( MGI:88459)
TS17 (10.5 dpc)
in situ hybridisation

Data Images
EMAGE:1073
COL6A 10.5

Expression pattern clarity: no stars
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
embryo
detected detected
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:2664168
Entity Detected:Col6a1, collagen, type VI, alpha 1 ( MGI:88459)
Sequence:sense strand is shown

>MGI:2664168
GGCATGAAGGGAGAGACGGGGTACCCAGGACTACCGGGCTGCAAGGGCTCCCCAGGATTTGATGGCATTC
AAGGACCCCCGGGTCCCAAGGGTGATGCTGGTGCCTCTGGGATGAAGGGAGAAAAGGGTGAAGCTGGAGC
AGACGGTGAGGCTGGGAGACCAGGGAACTCAGGGTCACCTGGAGATGAGGGTGATCCTGGAGAGCCTGGT
CCCCCCGGAGAAAAAGGAGAGGCCGGTGATGAAGGAAATGCTGGCCCAGACGGTGCCCCTGGAGAGAGGG
GTGGCCCTGGTGAAAGAGGACCTCGGGGGACCCCTGGTGTGAGAGGACCAAGGGGAGACCCGGGTGAAGC
TGGACCACAGGGTGACCAAGGAAGAGAGGGGCCCGTCGGCATCCCTGGAGACTCGGGTGAGGCTGGCCCC
ATTGGACCTAAAGGATACCGAGGTGATGAGGGTCCTCCAGGTCCTGAGGGCCTCAGAGGAGCCCCAGGAC
CTGTTGGTCCTCCTGGAGACCCCGGACTGATGGGTGAGAGAGGTGAGGATGGACCACCAGGAAACGGCAC
GGAAGGTTTCCCCGGC
Notes:Full length cDNA clone for this gene:NM_009933
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:CD1
Age:10.5 dpc
Theiler Stage:TS17
Mutations:none (wild-type)
Preparation:wholemount
Procedures
Fixation:4% paraformaldehyde
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Principal investigator:Cristina Caccioppoli, TIGEM, Via Pietro Castellino 111, Naples, Italy 80131
Submitted by:Cristina Caccioppoli, TIGEM, Via Pietro Castellino 111, Naples, Italy 80131
Experiment type:screen
References:[ doi:10.1038/nature01178] [ PMID:12466854] Reymond A, Marigo V, Yaylaoglu MB, Leoni A, Ucla C, Scamuffa N, Caccioppoli C, Dermitzakis ET, Lyle R, Banfi S, Eichele G, Antonarakis SE, Ballabio A 2002 Human chromosome 21 gene expression atlas in the mouse. Nature (420):582-6
Acknowledgments: This data was produced as part of this consortium  Human Chromosome 21 Expression 'Atlas'  Telethon Institute of Genetics and Medicine Naples ; Max Planck Institute Hannover; Division of Medical Genetics Geneva, Naples, Hannover, Geneva, Italy, Germany, Switzerland
Links:MGI:2666406 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEMAGE