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EMAGE:11544

Ankmy2 ankyrin repeat and MYND domain containing 2 ( MGI:2144755)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11544 EMAGE:11544 EMAGE:11544 EMAGE:11544 EMAGE:11544
"Pseudo-wholemount" of euxassay_006735. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_006735_01 euxassay_006735_02 euxassay_006735_03 euxassay_006735_04
EMAGE:11544 EMAGE:11544 EMAGE:11544 EMAGE:11544 EMAGE:11544
euxassay_006735_05 euxassay_006735_06 euxassay_006735_07 euxassay_006735_08 euxassay_006735_09
EMAGE:11544 EMAGE:11544 EMAGE:11544 EMAGE:11544 EMAGE:11544
euxassay_006735_10 euxassay_006735_11 euxassay_006735_12 euxassay_006735_13 euxassay_006735_14
EMAGE:11544 EMAGE:11544 EMAGE:11544 EMAGE:11544 EMAGE:11544
euxassay_006735_15 euxassay_006735_16 euxassay_006735_17 euxassay_006735_18 euxassay_006735_19
EMAGE:11544 EMAGE:11544 EMAGE:11544
euxassay_006735_20 euxassay_006735_21 euxassay_006735_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11544Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11544_wholemount_strong.wlz
11544_wholemount_moderate.wlz
11544_wholemount_weak.wlz
11544_wholemount_possible.wlz
11544_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11544_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7061
Entity Detected:Ankmy2, ankyrin repeat and MYND domain containing 2 ( MGI:2144755)
Sequence:sense strand is shown

>T7061
GCGCCAGCCCGGCTCGCTCAAGCTCGCCGCACCCGCCAGCCCCCAGCCGTGAGACCCTAGTGACTCTGCC
ACTTCACTGGGCTGCTGCTCCGGCCTCGAGTTGCCTTGCTGTGGCGGTCTTCCACGACGCATACACGTCT
CTTGTTTTTTTAAAAAACCTTTCCAAAGAAATAGAATAAGCGTCAAGCTGGCGGGAACGATGGGTCACAT
AAAGAAAGGCGAGCTGACCCAGGAGGAAAAGGAACTGCTGGAAGTGATCGGGAAAGGTACTGTCCAAGAA
GCCGGAAGACTGTTGTCTAGTAAGAATGTTCATGTCAACTGCTTGGATGAGAATGGAATGACTCCTTTGA
TGCATGCAGCCTATAAAGGGAAACTCGAGATGTGCAAGCTCCTCCTGCGCCATGGAGCTGACGCCAGTTG
CCATCAGCATGAGCACGGGTACACAGCCCTCATGTTTGCTGCGCTTTCCGGTAATAAAGACATCACTTGG
GTTATGCTGGAAGCAGGCGCAGAGACCGATGTTGTGAACTCGGTGGGAAGAACTGCTGCCCAGATGGCAG
CCTTTGTGGGTCAGCACGATTGCGTGGCTATCATCAACAATTTCTTCCCTCGAGAGAGACTGGATTATTA
CACTAAACCCCAGGGACTGGATAAAGAGCCAAAACTGCCTCCAAAGTTGGCAGGCCCGCTACACAAAATC
ATCACCACAACGAATCTCCACCCTGTCAAGATCGTGATGCTTGTGAGTGAGAACCCTCTGCTGGCAGACG
CAGCTGCTCTCGGTAAATGCTACAGGGTGATGGATTTGATCTGTGAGAAATGCATGAAACAGAGAGACAT
GAATGAAGTGTTGGCTATGAAAATGCACTACATCAGCTGCATCTTTCAGAAATGCATTACCTTCCTCAAA
GAAGGAGAGAATAAGCTGGACACCCTGATCAGAAGCTTGTTGAAAGGCCGAGCGTCTGATGGCTTCCCGG
TGTATCAGGAAAAGATCATCAGAGAAAGCATCCGGAAGTTTCCATACTGTGAAGCCACACTCCTACAGCA
GCTGGTGCGAAGCATCGCTCCAGTTGAAATTGTAAGGCTCCTCTTTTGCTAGGTTAAATGTCCAGTGAGC
CCAGACCACTGCATGCTGTGTCGCTAGGGACAAGTTCTCCTTACCATTCAGGGAATTTTTAGAAACCAAA
CGGTATTTTTCTACATAGGAAAGTTGTAAGTTATAAAGGGAGCGGGCCTGTGAATATCTTTGTGAAAGCT
AAGCTGGTTGGATGCCTGTCTACTGAAGGATGGTGACACACGTGTGTGCGTTGGTGGAAGAATTACTGGT
GGAAATTCCCAGAGTAGGTGGAGGCATAGATTGGTAGTCTAGGGTGCCAGGGTTAGGGCAATGGGCCACA
GCTGAACTAGCCAATAGAAGGCTGGCCGTGATTCCTGATAACAATCTCAAAGTGTGTCCCTGCTGCTTAT
ATGTAATTTTAGTGCCTCTAATTAGAAATGTTCCAACTTAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4010781 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4010781 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11541 same embryo
 EMAGE:11543 same embryo
 EMAGE:11545 same embryo
 EMAGE:11542 same embryo
 EurExpress:euxassay_006735 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS