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EMAGE:11558

Cdca7 cell division cycle associated 7 ( MGI:1914203)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11558 EMAGE:11558 EMAGE:11558 EMAGE:11558 EMAGE:11558
"Pseudo-wholemount" of euxassay_006768. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_006768_01 euxassay_006768_02 euxassay_006768_03 euxassay_006768_04
EMAGE:11558 EMAGE:11558 EMAGE:11558 EMAGE:11558 EMAGE:11558
euxassay_006768_05 euxassay_006768_06 euxassay_006768_07 euxassay_006768_08 euxassay_006768_09
EMAGE:11558 EMAGE:11558 EMAGE:11558 EMAGE:11558 EMAGE:11558
euxassay_006768_10 euxassay_006768_11 euxassay_006768_12 euxassay_006768_13 euxassay_006768_14
EMAGE:11558 EMAGE:11558 EMAGE:11558 EMAGE:11558 EMAGE:11558
euxassay_006768_15 euxassay_006768_16 euxassay_006768_17 euxassay_006768_18 euxassay_006768_19
EMAGE:11558 EMAGE:11558
euxassay_006768_20 euxassay_006768_21

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11558Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11558_wholemount_strong.wlz
11558_wholemount_moderate.wlz
11558_wholemount_weak.wlz
11558_wholemount_possible.wlz
11558_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11558_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8128
Entity Detected:Cdca7, cell division cycle associated 7 ( MGI:1914203)
Sequence:sense strand is shown

>T8128
CTCGGGGTGTTCGGGCTCTGAGTGCTGGTGTGTTCCGACGAACTATCCCCGTTCCGAGTGCCTGGGTACC
CGCCGCCAACATGGAGGCTCGCCGCGCGCGGCAAAAGGCTCTCAAAGTAAAGAACTTAAAGGATGTCAGA
TATATGAAGTTGATTTCCATGGAGACATCGTCCTCCTCCGATGACAGTTGTGACAGCTTTGCTTCTGATA
ATTTTGCAAACACAAGACTGCAGTTGAACAGGGAAGGCTGCAGGACCCGAAGTCAGTGCCGGCACTCCGG
GCCTCTCAGGGTAGCAATGAAGTTTCCGGCACGAAATACCCGGAGGGCGGCCAGCAAAAAAGCAGCGCCC
CCAAAGCCCTCTGAGAGCTCTGCAAACGATTCCCACTCTGACTCTGAAGAAGAAGAAGAAGAAGAAGAAG
AAGAAGATGGCATGAACTTTCTGGAGAAGAGAGCCTTAAATATAAAGCAGAACAAAGCAATGCTTGCAAA
ACTCATGTCAGAATTAGAAAGCTTCCCTGGCTTGTTCTCTGGACGACATTCCCTCCCAGGCCACAGAGCC
AAAGATTCAAAGTCGCCTAGACGACGCACATTCCCAGGTGTGGCTACCAGAAGGAACCCGGAACGGAGAA
CTCGACCTCTTACCAGGTCAAGGTCCCGGATCCTGGGCTCCTTGGGTGCCCTGCCCACCGAGGAAGAGGA
GGAGGAAGAGGAGGAGGAAGAGGATAAGTACATGCTGGTGAGACAGAGGAAGTCCATGGACAGCTACATG
AACGACGATGATGTGCCCAGAAGTCGGAGGCCTGGATCCATGACCCTTCCGCATATAATCCGACCAGTAG
AAGAAGTCACAGAGGAAGAGATTAGGAACATCTGCAGCAACTCGAGAGAGAAGATTTATAACCGCTCTCT
GGGTTCTACATGTCATCAGTGTCGCCAGAAAACCACTGACACCAAAACCAACTGCCGAAACCCAGACTGC
TGGGGCATCCGGGGTCAATTCTGTGGTCCCTGCCTTCGAAACCGCTATGGCGAGGAGGTCAAGGACGCTC
TGCTGGATCCGAATTGGCACTGCCCACCTTGTCGAGGAATTTGCAACTGCAGCTTCTGCCGCCAGCGTGA
TGGGCGGTGCGCCACTGGAGTCCTGGTGTATCTGGCAAGGTATCATGGCTTCGGGAACGTCCATGCTTAC
TTGAAAAGTCTGAAGCAGGAATTTGAAATGCAAGCGTAGAGCCTGAAGATTGTCTGCCCGCCTTCGGCCT
CTGAAGGCTCTCTTGTTCTCGACGTTGTGTTGATGGGAACCCGAGTAAGAATCTCGGCCATCCGTCTGCC
TTAGAACTTGGTCGCGTTGATCTCGTATCTCACACTTGTTTCTGAAGCATCATGAAAGGCATGCTACTCC
TTACATTTCAGCGATATGTAGTGTCTCAGAGCTTGCCCCGGCCCCACCTTGTAGCCTCCCTGGTCTTTTG
CCACCACTTAGATTCTGAGCTATCTTTAACTGGCAGCTTGAGAATTTGTGTGATCAGGACATACCCAAGC
ACTTTGGGGTACAGTAGTATTGTGAAGCAACGGTTGTGATGAATCACAGAGAAGAGCCCCTTAACTTGTT
TACACAGAATCAACGCACATAGTTTAGTGTCTAGTGTTTATATTGGCTAATGTTTTAAATGGAAAGGGCC
AAGGCACAAAGGGCCGGAAACCATGAGGAAGAATTAGGTAGTTGTTGTAAACTGGAGTATGGCCACATTG
GATGGCTTTCTGGAGGAATACATCTCTGGGGTGCTGTGCTCAGTGTACGTCTTGTCACAGCTGACACTGT
TGCTGCTGTCATCTGGCCTACCCAGTCACCCAAAGGTTTGTGGGAACTTGGTACCATAATTACTAAAAAT
TGCTGTAGAAAAGGTGTTCTGGGAAATTAAAGATGATAGCTCAGCAGCGGGTTGATCTGAAACCTTGGTG
TTCTGCTTCAGGAACTTAACCTTAATAATGTCACTTTAGATCCTGGCAGTTTCCTAAAGAGGTAACCCTG
GGGGTTGTGTCCAGGGTTTCTATATATTTAGGTTTTAAACACTTTTGGAATGATGGGAAGTGGCCTTTTA
GAGATGGGTAGCTTTGAACCTCTCTGCCAGTGTAGTTTATGGGTGGGTGCCTGAAGTCACCCTCCCTCCC
CTTTCCTTACAGGTGGGTCATTCAGTACTGGTGACGAAGTGACTGAGTCCCTCACCTGTGTAGCCTGTCA
GCTGTGCCTACTCTGTACTCTGTCTGTGGTGCTCAGTTGGATCTTGAATCATTCAGTGTAAATACAGCTT
TTTGCTCTGTAATGCTTTTATACAAAGGTTTTTATTTTAATAATAAAACATTTTGTTCTAAAAAAAAAAA
AAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:30474357 using vector (pSPORT1) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30474357 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11559 same embryo
 EMAGE:11557 same embryo
 EurExpress:euxassay_006768 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS