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EMAGE:11605

Llph LLP homolog, long-term synaptic facilitation (Aplysia) ( MGI:1913475)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11605 EMAGE:11605 EMAGE:11605 EMAGE:11605 EMAGE:11605
euxassay_006765_01 euxassay_006765_02 euxassay_006765_03 euxassay_006765_04 euxassay_006765_05
EMAGE:11605 EMAGE:11605 EMAGE:11605 EMAGE:11605 EMAGE:11605
euxassay_006765_06 euxassay_006765_07 euxassay_006765_08 euxassay_006765_09 euxassay_006765_10
EMAGE:11605 EMAGE:11605 EMAGE:11605 EMAGE:11605 EMAGE:11605
euxassay_006765_11 euxassay_006765_12 euxassay_006765_13 euxassay_006765_14 euxassay_006765_15
EMAGE:11605 EMAGE:11605 EMAGE:11605 EMAGE:11605 EMAGE:11605
euxassay_006765_16 euxassay_006765_17 euxassay_006765_18 euxassay_006765_19 euxassay_006765_20
EMAGE:11605 EMAGE:11605 EMAGE:11605 EMAGE:11605
euxassay_006765_21 euxassay_006765_22 euxassay_006765_23 euxassay_006765_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11605Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11605_wholemount_strong.wlz
11605_wholemount_moderate.wlz
11605_wholemount_weak.wlz
11605_wholemount_possible.wlz
11605_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11605_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8241
Entity Detected:Llph, LLP homolog, long-term synaptic facilitation (Aplysia) ( MGI:1913475)
Sequence:sense strand is shown

>T8241
GGCACGAGGGCGCCTGTACTTCCGGTTGGCGTCCCACGCGTGGTGCGCGGTGTTGTCTCTCAGGTGAAGC
ATGGCTAAAAGCCTGCGGAGTAAGTGGAAGAGGAAGATGCGGGCCGAGAAGAGAAAGAAGAATGCGCCAA
GGGAGCTCAACAGACTGAAGAGTATCCTCAGAGTGGACGGGGATGCTCTAATGAAAGACGTTGAGGAGAT
AGCAACCGTGGTGGTAGCCAAACCTCGCCAGGAGAAAATGCAGTGTGAGGAAGGGCGGTGTGACGGCGCA
GATGAGGAAAAGGATGACATGAAAATGGAAACTGAAATTAAGAGAAACAGAAAGACTCTTCTAGACCAGC
ATGGCCAGTACCCAGTGTGGATGAACCAGAGGCAAAGAAAAAGACTGAAGGCCAAGAGAGAAAAGAAACG
AGGGAAAAGCAGAGCAAAGGCCGCGAAGGGCCTGGCCTGGTAGACCTTAAAGACTGGCAAGGGAGACAGG
CGTGGTGGTGCACCCCTTTCATCCCAGCACTCAAGAGGTGGAGGCAGGTGGATCTCTGTGAGTTCAAGGC
CAGCCTGGTCTACAGAGCAATTCCAAAGCACCCAGGGCTCCATTACACAGAGAAACCGTGTCTTGAAAAT
ACAAGCAAACAAACAAACAAAAAACCCAGAAACTTTGTTTTCAGTTTGTACTTAGTTCTGTAATTCAAAC
CAAAATAACTCATTTGTGTTAGAAACTTGAATAAAATCTCTTTGGTGATGAAAGAATGTTATGCTGAAGT
TGTGATTGGATACTGCCTGGCACTGAGTATTGTAAGCATTGATGTGGTTATAACTATTTGATCTTACAGA
ATGGCCATTGTACTCAGTTCCTCAGATTAAACATGCTTATATCAAAATAGTATAGGCAGAAAGCTATTAC
ATTATCATATTCAAAAATAGGGTATCAAGAGCCTGAGGAAGAGTCAACTTCTGTTTCTTGTTGGGTGGCT
CAAAACCAACTCCCAAGGATGCGCCCTCTTGTGGCCGTCACTGGCACCGACATTCTATGCACACCTTCCC
ACGCACTAATAACTAAAATAGTCTTAAAAAGGCCATCAGTGGATCTTACCAGTAGTACTTACTTGAAGTG
TTTATTTTTTTATAATTCATAATAAATGATATTTTGCGTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:1332438 using vector (pT7T3D-PacI) specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:1332438 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11607 same embryo
 EMAGE:11603 same embryo
 EMAGE:11604 same embryo
 EMAGE:11602 same embryo
 EMAGE:11606 same embryo
 EurExpress:euxassay_006765 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS