Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:11660

Lyplal1 lysophospholipase-like 1 ( MGI:2385115)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:11660 EMAGE:11660 EMAGE:11660 EMAGE:11660 EMAGE:11660
"Pseudo-wholemount" of euxassay_008389. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_008389_01 euxassay_008389_02 euxassay_008389_03 euxassay_008389_04
EMAGE:11660 EMAGE:11660 EMAGE:11660 EMAGE:11660 EMAGE:11660
euxassay_008389_05 euxassay_008389_06 euxassay_008389_07 euxassay_008389_08 euxassay_008389_09
EMAGE:11660 EMAGE:11660 EMAGE:11660 EMAGE:11660 EMAGE:11660
euxassay_008389_10 euxassay_008389_11 euxassay_008389_12 euxassay_008389_13 euxassay_008389_14
EMAGE:11660 EMAGE:11660 EMAGE:11660 EMAGE:11660 EMAGE:11660
euxassay_008389_15 euxassay_008389_16 euxassay_008389_17 euxassay_008389_18 euxassay_008389_19
EMAGE:11660 EMAGE:11660 EMAGE:11660 EMAGE:11660 EMAGE:11660
euxassay_008389_20 euxassay_008389_21 euxassay_008389_22 euxassay_008389_23 euxassay_008389_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:11660Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
11660_wholemount_strong.wlz
11660_wholemount_moderate.wlz
11660_wholemount_weak.wlz
11660_wholemount_possible.wlz
11660_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:11660_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7163
Entity Detected:Lyplal1, lysophospholipase-like 1 ( MGI:2385115)
Sequence:sense strand is shown

>T7163
GCGCGCGCGGCCCCGTGACGCTAGGGACGTGGCCGCGCGCCTTGCCATCTCTCCTCCGCCATGGCTGCTG
TGCCCAGCGCTGTTCACCTGCCGCGTTGTGTGGTGTCCCCGACCGGGAGACACAGTGCCTCGCTGATCTT
CCTGCACGGCTCAGGTCACTCTGGCCAAGGACAGAGAGAGTGGATCAAGCACGTGCTAAACCAAGACTTA
ACATTCCAGCACATAAAGATCACTTATCCAACGGCCCCCTCCAGGCCGTATACTCCTCTGAAGGGAGGGC
TCTCCAATGTGTGGTTTGACAGATTTAAAATATCTATGGACTGCCCAGAACACCTTGAATCAATTGATAG
TATGTGTCAAGTGCTCAGTGGATTGATTGATGAAGAAGTAAAAACTGGCATTCAGAAGAGCAGGATATTA
ATAGGGGGATTTTCTATGGGAGGCTGCATGGCGATGCATTTAGCATACAGAAGTCACCCAGATGTGGCAG
GAGTGTTTGTTCTTTCTGGTTTTCTGAATAAAGCATCTGTTGTTTACCAGGACCTTCAGCAAGGTGGCCG
CATGCTCCCTGAGCTCTTCCAGTGTCACGGCTCTGCAGATAACCTAGTTCTGCATGCTTGGGGCAAGGAG
ACAAACTCAAAACTGAAATCTCTAGGAGTGAGCACAACGTTTCACAGTCTTCCGAATCTTAACCATGAGC
TCAACAAAACTGAGCTGGAGAAGCTAAAGTCATGGATTCTCACAAGGCTGCCAGGAGAGACAGATGGGCA
GAGTGAATGATTCCTGACCAGCATATTGATTGTTCACCTTCCATTTAACATTTTTTCTTATTTGATCCTC
ACAAAAATTAAGGTTTTTGAAACAGCCCGTGCCCCTATATTATACAAATGAAATTGCATATCTGTCTATT
TTCATTCAACAAGATTGTCTTGTAAATCATCATGTAGTGAATGTCAACTGTTCATTTTGTTGCTGCATAG
GTACCATTGAGGGGGCACACTGGAATGTGCTTGTCCATGCATCACAGATTTGGGTGACTTCCTGTGTGAG
GCTGTCATAAATAGGGCTGCTATGAGGTGCAAACATCCACCCTAAGGTGGAGAGCTGGGTGACAGTGTTA
TAGCATCGCCTGAAACGGCCCAGCTGCTTCTCAATGTGGCTTTAGCACCTTCCATTCCAGTCAGCAGTGT
GGTGGCCCCTGAGGCCCAGTTATGCACCTGACCTTCATCTTGTTTGTTCTGGTGGCTTCATAGTGTTCAC
GTAGCATTTGATTTCTGCTTTCTTGGTGCCAATGATGCGATACAGAATCCTACACTGAAGGCTTCCCAGA
TTTGTGAAAATCAGTTTGCCCTGCCCAATCTGTTTGTAGATTATCTTTGTGAAAATTATTCACTGCCAAG
ATAATGACAAATAAATTATGAATAAATAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4023059 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4023059 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:11657 same embryo
 EMAGE:11658 same embryo
 EMAGE:11659 same embryo
 EMAGE:11656 same embryo
 EMAGE:11655 same embryo
 EurExpress:euxassay_008389 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS