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EMAGE:12303

Gmppb GDP-mannose pyrophosphorylase B ( MGI:2660880)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:12303 EMAGE:12303 EMAGE:12303 EMAGE:12303 EMAGE:12303
"Pseudo-wholemount" of euxassay_006974. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_006974_01 euxassay_006974_02 euxassay_006974_03 euxassay_006974_04
EMAGE:12303 EMAGE:12303 EMAGE:12303 EMAGE:12303 EMAGE:12303
euxassay_006974_05 euxassay_006974_06 euxassay_006974_07 euxassay_006974_08 euxassay_006974_09
EMAGE:12303 EMAGE:12303 EMAGE:12303 EMAGE:12303 EMAGE:12303
euxassay_006974_10 euxassay_006974_11 euxassay_006974_12 euxassay_006974_13 euxassay_006974_14
EMAGE:12303 EMAGE:12303 EMAGE:12303 EMAGE:12303 EMAGE:12303
euxassay_006974_15 euxassay_006974_16 euxassay_006974_17 euxassay_006974_18 euxassay_006974_19
EMAGE:12303 EMAGE:12303 EMAGE:12303 EMAGE:12303
euxassay_006974_20 euxassay_006974_21 euxassay_006974_22 euxassay_006974_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:12303Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
12303_wholemount_strong.wlz
12303_wholemount_moderate.wlz
12303_wholemount_weak.wlz
12303_wholemount_possible.wlz
12303_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:12303_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T9951
Entity Detected:Gmppb, GDP-mannose pyrophosphorylase B ( MGI:2660880)
Sequence:sense strand is shown

>T9951
GTCTTCTGTTCTGGCTGATCCTGGACCCCACATCAGGGTAGAGCAGGGGGGCGAGGTGACACCAGAGTTG
GTCAGTCTAGTTGGTGAAACGTGCAGACGCCATGAAGGCACTGATCTTGGTGGGAGGGTATGGGACACGG
TTGCGGCCGCTGACGTTGAGCACTCCGAAGCCATTGGTGGACTTCTGCAATAAGCCCATCTTGCTGCATC
AAGTGGAGGCGCTTGCTGCGGCAGGTGTGGACCACGTGATCCTGGCAGTGAGCTACATGTCACAGATGTT
GGAGAAGGAAATGAAGGCACAAGAGCAAAGGCTTGGAATCCGAATCTCTATGTCTCATGAAGAGGAGCCT
TTGGGGACAGCTGGGCCTCTGGCGTTGGCCCGAGACCTACTATCTGAGACTGCCGACCCTTTCTTCGTTC
TCAACAGTGATGTGATATGTGATTTCCCCTTCCAAGCCATGGTGCAGTTTCATCGGCACCATGGCCAAGA
GGGCTCCATCTTGGTTACCAAGGTGGAAGAGCCTTCCAAGTATGGTGTGGTGGTATGTGAGGCTGACACA
GGCCGCATCCACCGTTTTGTTGAGAAGCCACAGGTGTTTGTGTCCAATAAGATCAACGCAGGCATGTACA
TCCTGAGCCCTGCTGTGCTGCAGCGCATCCAGCTGAAGCCTACATCCATTGAGAAGGAGATCTTCCCAGT
TATGGCCAAGGAGGGGCAGCTATATGCCATGGAGCTGCAGGGCTTCTGGATGGACATTGGACAGCCCAAG
GATTTCCTCACTGGCATGTGCCTCTTCCTACAATCGCTGAGACAGAAGCATCCAGAGAGACTGTACTCAG
GCCCTGGCATTGTGGGGAATGTACTTGTGGACCCAAGTGCCCGTATCGGTCAGAACTGCAGCATTGGCCC
CAATGTAAGCCTGGGTCCTGGTGTGGTGGTGGAGGATGGTGTGTGCATCCGGCGATGCACAGTGCTTCGT
GATGCTCACATCCGCTCCCATTCCTGGCTTGAGTCATGCATCGTGGGCTGGCGCTGCCGTGTGGGCCAAT
GGGTGCGCATGGAGAATGTAACAGTGCTGGGTGAAGATGTCATAGTTAATGATGAACTGTACCTCAATGG
AGCCAGCGTGCTGCCCCACAAGTCTATCGGGGAGTCAGTACCAGAACCTCGTATTATCATGTGAAGGATA
TGGAGGGCTGGCCAAGCATCCACTTTGCCATCAGCAGGGTAGGACTCAATGCTTCACGAGGCCCTGGACT
TGGTGCCATTTGTCTAGGGAGGAGTGGATGACTCTGAAGCTGTCGGACTTCTGCCTTCTGGTGGGGACAG
ACATGGACAGGACCCTGCTGGGTGTAACCCACAAGCCCCCACTCCCTCAAGAAGAGCGGGCCCAGGGCTG
TTTGGAATAATAATTTAATGCTCACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:30249330 using vector (pDNR-LIB) specific primers. Forward Primer - name:M13 forward (-21), sequence:TGTAAAACGACGGCCAGT; Reverse Primer - name:T3-pDNR-LIB rv, sequence:CAAATTAACCCTCACTAAAGGGTGTTCACTTACCTACTGGGC. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:30249330 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:12304 same embryo
 EMAGE:12302 same embryo
 EMAGE:12301 same embryo
 EurExpress:euxassay_006974 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS