Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:14104

Trp53rk transformation related protein 53 regulating kinase ( MGI:1914050)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14104 EMAGE:14104 EMAGE:14104
euxassay_003983_01 euxassay_003983_02 euxassay_003983_03

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14104Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14104_wholemount_strong.wlz
14104_wholemount_moderate.wlz
14104_wholemount_weak.wlz
14104_wholemount_possible.wlz
14104_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14104_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4366
Entity Detected:Trp53rk, transformation related protein 53 regulating kinase ( MGI:1914050)
Sequence:sense strand is shown

>T4366
CGGACGCGTGGGTCGACCCACGCGTCCGGAAGCGGCGCGGTCAGGGTCGGAAGGAGTCGGAGGCATGGCT
GGTGTGTCCTCGGAGGCGGAGGCCGAGGCGCTGGCCGCGGCGCGCGAGCGGAGCCGCCTCTTCCTGAGCG
GCCTAGAGCTGGTGCAGCAGGGCGCCGAGGCGCGCGTTTTCCGTGGCCGCTTCCAGGGCCGCGCGGCCGT
GGTGAAGCACCGCTTCCCGAAGAGTTACCGGCACCCGGAGCTGGAGGCGCGGCTCGGCCGTCGGCGGACG
GTGCAGGAGGCGCGCGCGCTGCTCCGCTGCCGCCGTGCGGGGATAGCTGCCCCAGTCGTCTTCTTTGTGG
ACTATGCGTCTAACTGCTTATATATGGAAGAAATCGAAGACTCGGTGACTGTTCGGGATTATATCCAATC
CACTATGGAGACTGAAAAGGACCCCCAGTGCCTCTTGGACCTGGCCAGGAGGATGGGGCAGGTTCTGGCC
GGAATGCACGACCAAGACCTCATTCACGGGGACCTCACCACCTCCAACATGCTCCTGAGGCGGCCCCTGG
CGCAGCTGCACATCGTGCTCATCGACTTTGGGCTGAGCTTTGTCTCAGGACTGCCGGAAGATAAAGGCGT
CGACCTCTATGTCCTGGAGAAGGCCTTCCTCAGCACGCACCCCCACACCGAGACCGCGTTTGAAGCCTTT
CTGAAGAGTTACGGGGCCTCGTCCAAGAAGTCCAGTCCAGTGCTGAAGAAGTTAGATGAGGTGCGCCTGA
GAGGGCGAAAGCGGTCCATGGTCGGGTAGTGGAGCTGTGGTGAACTGGCTCACGGTGAAGGATGATGTAG
ACGAGGCTGGACCCCTCAGCAAAGCATGGGTTGTTAAGTGGTCTGTGATCGTGCTGGGCCACCACCATCC
ATGGCTCACTGTTCTCAGGGGCTTTATGTACATGAGGTTTATTCTGGGCAGAACTGGGTAGGTAGCCCAG
GCTAGCCTTGAATTTATGGCAACATCCTACCTCAGCTTGCTTGGAAGAGGTTATAAGCCACCATACCTGA
CTTTGCACTGATTCTGTCAGAAACAAAACAACTATGACTCTATTTGTTTTTATATCTTCTTATATTTATT
TTGTGTGTGTGCAAATGTGTCCATGGAGGTCAGAGAAGAACTTTTGAGAGTTAGCTCTCTGGATCTGTGT
TGTAGAATCTGCCATATGGATTTCAGGGATTGAGTTCAGGTGATTAGGCTTGGCCATAAAATCCTGTATC
CGGCGAGCCATCTCACTGGCTCACAAAACTATTTTTATGTTAATGGGCGGAATGGAGCTAGGACGTGGGG
TGGTAGCTGGCGGGGGTTGGGCTAAGTCTGATTGAAGCAGGGTTACAGAGGCTACATTAGTGCCTGGTGT
ACATGTCCTGCCATTTGCCAGAGCAGCATGCATTGTTAACTGCTGAGCCATCTCTTCAGCTTCCTAAATT
TTTGTTTTGTTTTGTTTTTCAAGACAGGGTTTCTCTGTGTAGCTCTGGCTGTCCCAGAAACTCACTCTGT
AAGCTCAGGCTGGCCTTAAACTCAGAGCCACCTCCTCTGCCTCCTGAGTGCTGGGATTAAAGGTGTATGT
CACTACTGCTTAGCTAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4910610 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4910610 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14103 same embryo
 EMAGE:14105 same embryo
 EMAGE:14102 same embryo
 EurExpress:euxassay_003983 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS