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EMAGE:14117

Ube2e2 ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) ( MGI:2384997)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14117 EMAGE:14117 EMAGE:14117 EMAGE:14117 EMAGE:14117
"Pseudo-wholemount" of euxassay_001796. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_001796_01 euxassay_001796_02 euxassay_001796_03 euxassay_001796_04
EMAGE:14117 EMAGE:14117 EMAGE:14117 EMAGE:14117 EMAGE:14117
euxassay_001796_05 euxassay_001796_06 euxassay_001796_07 euxassay_001796_08 euxassay_001796_09
EMAGE:14117 EMAGE:14117 EMAGE:14117 EMAGE:14117 EMAGE:14117
euxassay_001796_10 euxassay_001796_11 euxassay_001796_12 euxassay_001796_13 euxassay_001796_14
EMAGE:14117 EMAGE:14117 EMAGE:14117 EMAGE:14117 EMAGE:14117
euxassay_001796_15 euxassay_001796_16 euxassay_001796_17 euxassay_001796_18 euxassay_001796_19
EMAGE:14117 EMAGE:14117 EMAGE:14117
euxassay_001796_20 euxassay_001796_21 euxassay_001796_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14117Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14117_wholemount_strong.wlz
14117_wholemount_moderate.wlz
14117_wholemount_weak.wlz
14117_wholemount_possible.wlz
14117_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14117_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4424
Entity Detected:Ube2e2, ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) ( MGI:2384997)
Sequence:sense strand is shown

>T4424
CTCGGCGTCGGAGCCGCGGCTGGAGCGCGGGCGACGCCGCGAGGATCTAAGATGTCCACTGAGGCGCAGA
GAGTTGATGACAGTCCAAGCACTAGTGGAGGAAGTTCTGATGGAGATCAGCGGGAGAGCGTTCAGCAGGA
ACCTGATCGAGAACAAGTTCAGCCTAAGAAAAAGGAGGGGAAGATATCCAGCAAGACAGCCGCGAAACTG
TCAACCAGTGCCAAAAGAATTCAGAAGGAGCTTGCAGAAATCACGCTGGATCCCCCTCCCAACTGTAGTG
CTGGACCCAAAGGAGACAACATTTATGAATGGAGGTCAACTATATTGGGACCCCCAGGATCTGTCTATGA
AGGAGGGGTATTCTTTCTTGACATTACCTTTTCACCAGATTATCCGTTTAAACCCCCTAAGGTCACCTTC
CGAACGAGAATCTATCACTGTAATATCAACAGCCAGGGTGTAATCTGTCTGGACATCCTCAAGGACAACT
GGAGTCCGGCCCTGACCATCTCTAAAGTCCTCCTGTCCATCTGCTCACTACTTACAGACTGCAACCCTGC
CGACCCTCTGGTGGGCAGTATTGCCACACAGTACATGACCAACAGAGCGGAGCATGACCGGATGGCCAGA
CAGTGGACCAAGCGGTACGCCACCTAGGGGCCTGCGTGTGCCAGCTGTGTGCCAGCACATTCACCAAGTG
CATCAGTACCCACCTGCTCCTGCAGCCCTCCGTTCTGTCGCCTGTTGTTATTACATTTTAAACTGTTTGG
GGATGGTATGTCATCTGTCCCTCCTCCTTCCTACCGCCACCTCCTCCCCTTCTCTCTGTCCCTCTTTTTC
CTTTTATTCCATTTTCGGTTTCTGTTAACTTGAAAGATTTGGGATTCCCCCACTGCAGTGTGGATGGGAG
TTTCTGTTTTAAGTACAAACCATGTTGGAGCTATACTAGTAAGACCTTTCATACAGAGCTTTGTGTTACT
GTGTGGTTTGGGTTTTTGTTGTTGTTGTTTGTTTTATCTTTTTTTTTTCTTTTATGTGCTCTTCGGGGAA
AACAAACATTCAGGAGTATATCTCGTTTATACTTAAATGTAGTGCTTAGGGTTAATTTTTTGTACTGAAG
TCTATTGGTGGGTGCATGCTACTGGGAACAAGGTTTTGTACAAAAGGTCCAATCAGAATCACTGTGCATT
ACTGAGACCCTGTCACAAGCCTTCTGTCCCCCACACAGAAGACTGTCAGATTGAACAAAATAATATGTAT
TTTGATTTACTTAAGTGCTTGTAAATTTCTTAGGGACCTGCCACTTTTGACTGTGGATCAGTTGATGTAT
ACTTGTATTATTAATGCCTCAATAAATCACTGTGGCGGATCAATAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4923869 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4923869 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14118 same embryo
 EMAGE:14116 same embryo
 EurExpress:euxassay_001796 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS