Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:14289

Lactb lactamase, beta ( MGI:1933395)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14289 EMAGE:14289
euxassay_004107_01 euxassay_004107_02

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14289Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14289_wholemount_moderate.wlz
14289_wholemount_weak.wlz
14289_wholemount_possible.wlz
14289_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14289_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5579
Entity Detected:Lactb, lactamase, beta ( MGI:1933395)
Sequence:sense strand is shown

>T5579
GCCGGCTCTGCGGAGGCAACATGTACCGGCTCCTGTCAAGCGTGACAGCTCGGGCTGCGGCCACCGCAGG
CCCAGCCTGGGACGGAGGGCGGCGCGGGGCGCACAGGCGACCGGGCCTGCCTGTGCTGGGCCTTGGTTGG
GCCGGCGGCCTGGGGCTCGGGCTGGGGCTGGCTCTCGGCGCGAAGCTGGTGGTCGGGCTGCGGGGCGCCG
TCCCCATTCAGTCCCCCGCGGACCCCGAGGCGTCCGGCACTACCGAGTTATCGCACGAGCAGGCCCTGAG
CCTGGGGAGCCCGCACACGCCTGCGCCGCCAGCAGCCAGGGGCTTCTCCAGAGCCATCGAGAGCAGCGGC
GATCTGCTACACCGGATCAAGGATGAGGTTGGTGCCCCCGGCATCGTGGTTGGAGTTTCTGTAGATGGAA
AAGAAGTCTGGTCAGAAGGTTTAGGCTATGCAGACGTGGAGAACCGAGTACCCTGTAAACCAGAAACGGT
CATGAGAATCGCAAGCATCAGCAAAAGCCTCACCATGGTGGCTCTGGCTAAACTGTGGGAAGCAGGGAAG
CTGGATCTGGACCTTCCTGTGCAGCACTATGTTCCCGAGTTCCCAGAAAAAGAATACGAGGGTGAAAAGG
TTTCTGTCACAACAAGATTACTAATTTCACATTTAAGTGGAATTCGTCATTATGAAAAGGACATAAAGAA
AGTGAAAGAAGAGAAAGCTTATAAAGCCCTGAAGATGGTGAAAGGGACCCCGCCACCGCCTGACCAAGAA
AAAGAACTGAAAGAAAAGGGAGGCAAAAACAACGAAAAGAGCGACACACCGAAAGCCAAAGCCGAGCAGG
ACAGCGAAGCCAGATGCCGCAGCGCGAAGCCAGGCAAGAAAAAGAATGACTTCGAACAAGGCGAATTGTA
TTTGAAAGAAAAGTTTGAAAATTCAATTGAATCACTAAGATTATTTAAAAATGACCCTTTATTCTTTAAA
CCTGGTAGTCAGTTTTTGTATTCAACGTTTGGCTATACTCTGCTGGCAGCCATAGTAGAAAGAGCTTCAG
GATATAAATATTTGGATTATATGCAGAAAATTTTCCATGATTTGGACATGCTGACAACTGTCCAGGAGGA
AAACGAGCCAGTGATTTACAACAGAGCAAGATTTTACGTGTACAATAAAAAGAAACGTCTTGTCAACACA
CCTTACGTGGATAACTCCTATAAATGGGCTGGTGGTGGATTTCTGTCCACAGTGGGTGACCTCCTGAAAT
TTGGAAACGCAATGCTGTATGGCTACCAAGTTGGGCAGTTTAAGAACTCAAATGAAAATCTCTTGCCTGG
ATATCTCAAGCCAGAAACGATGGTGATGATGTGGACCCCAGTCCCTAACACAGAGATGTCCTGGGATAAA
GAGGGGAAATATGCAATGGCGTGGGGTGTGGTAGAGAAGAAGCAAACGTACGGATCCTGCAGGAAGCAGC
GGCACTACGCCTCACATACTGGAGGTGCTGTGGGTGCCAGTAGTGTCCTGCTGGTCCTACCTGAAGAACT
GGACTCAGAGGCCGTAAATAACAAGGTTCCCCCACGAGGAATAATCGTCTCTATCATATGCAACATGCAG
TCTGTGGGGCTCAATAGCACTGCTTTGAAGATCGCTCTGGAATTTGATAAAGACAGAGCTGACTAATCCT
AATGGCAGCACAGGTCCACAGTGAGCCTTCCATTCTTTGAAATGTTGACGTCCCCAAATACATAAACCCT
TTAAGGATACATTTGTAATAGAATACAGTTAAATGTGGGGAATTATGTACCTCTAATTGCTTAATTTTGT
AACTGCCTTTTTATTGGACAATTAGTTCTTTACACTCAGGGAAATAACAGTTGTTTCTACTTTTTAAAAA
AAATGTTTACTCTTGAAATAAAATCTTCTGATAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6484767 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6484767 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14290 same embryo
 EMAGE:14288 same embryo
 EMAGE:14287 same embryo
 EMAGE:14291 same embryo
 EMAGE:14292 same embryo
 EurExpress:euxassay_004107 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS