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EMAGE:14313

Nsun6 NOL1/NOP2/Sun domain family member 6 ( MGI:1921705)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14313 EMAGE:14313
euxassay_004140_01 euxassay_004140_02

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14313Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14313_wholemount_strong.wlz
14313_wholemount_moderate.wlz
14313_wholemount_weak.wlz
14313_wholemount_possible.wlz
14313_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14313_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7837
Entity Detected:Nsun6, NOL1/NOP2/Sun domain family member 6 ( MGI:1921705)
Sequence:sense strand is shown

>T7837
GGTTTTGGAAAATAGCATGTCAGAGTGGATCTAGGCGCTGTCTGTTTTCCGATCTGCGTTTAGGTACACT
TTTTGTCACCAAGCCCTATTTGGCGCAGTGTCGCAGTTCGGAGCTGTCTCACAGCATCCCAGAGAACGAC
AAACCTTGGGCCCTGCTCATTCCAGAACTCAGCACTGAAAGGCATTCTTGTGCTCGTCCATTGGCTGGCA
ACGCTGAAATTCGGAAATAAAGACTGCTTCCCAACATTTTCTTGGACAACTTAAAACAGAAAAAAATCAA
AAGAATGTATGTATTTCCAAAGATATCTTTGAGACCTGAAGTTGAAAACTATCTCAAAGAGAGCTTTTTG
AACGAGGAGGCTGTGTCTGCTTCAAGCAGACAAGAAGCAGAAAGGAAATTTGAGACTCTGCTGCTTCGCC
TGTCACACCCTCCGTCGATGACAACTGTCAGAGTGAATACGCATTTAGGCTCAGTTCAGCATGTCAGAGG
TCTGCTGCTTGAAGAGCTCCAGAAGCAGTTTGGTGAATCCAGCATTCCTGTTGTTCAGCATCCAGCCCTC
CCGGATGTCTTGCTCATCCCCATGACTGGACCAAGGAAGAATATAGAAAGACAACAGGGTGAAGTGATTG
TTGGCGCACAGTGTGGCAATGCAGTGTTAAGAGGGGCCCATGTCTATGTTCCAGGAATTGTGTCAGCTTC
AAAATTTATGAAAGCTGGAGATGTTATTTCCGTGTATTCTGATATTAACGGCAAATGTAAGAAAGGAGCC
AAAGAATTTGATGGAACTAAAGTATTTCTCGGAAACGGAATTTCTGAACTGAGCCGCAAAGATATCTTCA
ATGGGTTACCTGATCTGAAAGGTATAGGCATAAGAATGACAGAACCCATATATCTCAGTCCCTCGTTTGA
CAATGTTCTACCCAGTTATATATTTTTACAGAATTTACCATCTACAGTTGTAGCTCATGTTCTTGATCCT
CAACCTGGAGAGAAGATTCTAGAGATGTGTGCAGCCCCTGGGGGCAAAACTACACATACTGCAGCACTGA
TGCAGGACAAGGGAGAAGTAATAGCATTGGACAAAATATTGACAAAAGTGAACAAACTGAAGCAGAATGC
TTCATTATTAGGGCTTCATTCTATCCGGGCATTTTGCTTCGATGCAACAAAGGCACTTAAGCTTGATACT
ACCGATGGCATAGAAGGGGGGCCTCCATTCTTACCAGAATCTTTTGACCGAATTATCCTTGATGCACCCT
GCAGTGGAATGGGACAGAGGCCAAATATGGCTTGTACTTGGACTTTAAAGGAAGTGACATCCTATCAGCC
ACTACAGCGAAAACTCCTTCATGTGGCAGTTCAACTCCTGAAGCCAGGGGGAGTGCTGGTCTACAGCACA
TGCACAATAACCTTGGCAGAAAATGAAGAGCAAGTTGCCTGGGCCCTCCGAACATTCCCCTGCCTTCAGC
TTCAACCCCAGGAACCACAGATTGGAGGAGAAGGGATGGTGGGAGCTGGCCTGACATTGGAGCAATTGAA
GCAGCTGCAGCGATTTGATCCGTCTGTTGTACCACTGCAGAACATGGACACTGATTCTCTTGGAGAGGCC
AGAAGGGAAGACATGATTTGGTTGGCCAACAAAGACTGTATAGGCTTCTTTATTGCAAAGTTTCTAAAAT
GTCAAAGCACAAAAGCGAAGGTTTCTCAGAAATGAAAATTCTGAAGACTGTCTGTGTGTGGGGCTTTTTC
TTACACAGAAGTGTTGTCAAGCCAACGGAGTGATGGCATGGTTGCTCAGGAAACAGGATGATGCTAATGG
CTTCCCTGGGATCGGAAGGAGCAGCATGCATACGTGGTTCTGGGGAAGTGGGGGATAGGAAAGCATAATC
AGCCTCATGCTTTATGAAAGGAAAGGAGTTGCCTGTGGGGGTCTGGAATATAATTTCAGTTTTAACTCAT
AACTATTAGTCTTTCTAATGTCATAAATATTGTCTTTCTATCAAAAAAAATAGTTTGAAAACAAGAACAA
AGCTCTAAAGCTTTCAAGTGGTTATGAAAAACTGTTTTCAGTTTCCAAGATGGTGGTAGCTTCTTCAGTA
AGTTTTCAGGACATGGACAGTAACACTAACCTCATCATAACTGAGGTAAGTAGGCTCGTTGCTGGAGTCT
GCCTCTGTCTCTCTCTGCTTACTGATTGTAAATCTGGCTTCTTAATTTAAAGGTTTATTTCTGTACTGAG
TATGTGTGTGGAACACATGGTGAAGTCAGAGGACCACGTTTGAGAATCAGTTTCTCGCCTCTACCTTGGG
TTCTGAAGCTTGATCTCAGATCCTCAGGTTTGTGTTGCAAGTCCTTTTTCCCTGCTGAGTCATTTCACCA
GGCCGCAGGTCACTTCTAAATAAAGCTTGGATTTGCGCTAAATACTTTGAAAGGTGAAGTCTAGTGATTT
ACGTTGTAGTTAAAATGGCCATTGAGAAGTACTCCACATTTTGGCTGTATTTTATCATCTTTGGGAACAG
ACATCATGCAAAATAATAGGGAAATGCTTGGTGAGGAGGAGAAAAGCAGTTACTGAGAGCCAGGACTCCC
ATCCCCAGGAGCTGTTCCAGAGGTTATTATGTTAGAGTTCTAGATTTAAAGGGTTGCCTTTTTACTATAA
AATTACAACCAGAAGACACACAAAGACTTGCTTCCATCATTCCTTCTGTCAATTTTCAAAGGCCATTTCA
AAGGTATCAATGGAAGGTTCTCCCCCAAGGTATGAAGAACGGTCCTACTCTGTCAGAAATTTGTGGATCA
AGCTTCATGATTCATTAGGGTCAAGTATAAAAAGGCTTTTATTTTACATTATATGATTGATATTCTTATA
GCAGAAAAAATAAAGGATTTAACTGAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6335896 using vector (pCMV-SPORT6.1) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6335896 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14314 same embryo
 EMAGE:14310 same embryo
 EMAGE:14311 same embryo
 EMAGE:14312 same embryo
 EurExpress:euxassay_004140 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS