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EMAGE:14383

Sav1 salvador homolog 1 (Drosophila) ( MGI:1927144)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14383 EMAGE:14383 EMAGE:14383 EMAGE:14383 EMAGE:14383
"Pseudo-wholemount" of euxassay_004210. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004210_01 euxassay_004210_02 euxassay_004210_03 euxassay_004210_04
EMAGE:14383 EMAGE:14383 EMAGE:14383 EMAGE:14383 EMAGE:14383
euxassay_004210_05 euxassay_004210_06 euxassay_004210_07 euxassay_004210_08 euxassay_004210_09
EMAGE:14383 EMAGE:14383 EMAGE:14383 EMAGE:14383 EMAGE:14383
euxassay_004210_10 euxassay_004210_11 euxassay_004210_12 euxassay_004210_13 euxassay_004210_14
EMAGE:14383 EMAGE:14383 EMAGE:14383 EMAGE:14383 EMAGE:14383
euxassay_004210_15 euxassay_004210_16 euxassay_004210_17 euxassay_004210_18 euxassay_004210_19
EMAGE:14383 EMAGE:14383
euxassay_004210_20 euxassay_004210_21

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14383Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14383_wholemount_strong.wlz
14383_wholemount_moderate.wlz
14383_wholemount_weak.wlz
14383_wholemount_possible.wlz
14383_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14383_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7144
Entity Detected:Sav1, salvador homolog 1 (Drosophila) ( MGI:1927144)
Sequence:sense strand is shown

>T7144
GCAGCCGCCCGCGCCCAGTGAGGATATCTGGAAGAAATTCGAGCTGCTTCCCACCCCGCCCCTGTCCCCG
AGGCGAAGGCGGCGGCGGCGGCCCGGGAGGCGGCGGCGGGCGGCAGGCTCGCGGCCCTAGCGAGGCTGCT
GGGGCGGCGGCGGGAGTCGTCCGCGAGGATGCTGTCCCGCAAGAAAACCAAAAACGAGGTGTCTAAGCCG
GCCGAGGTGCAGGGCAAGTACGTGAAGAAGGAGACGTCGCCCCTGCTGCGGAATCTCATGCCTTCATTCA
TTCGGCACGGTCCAACAATTCCCAGACGGACTGACCTCTGTCTTCCAGATTCAAGTGCTACTGCTTTCTC
AGCTTCTGGAGACGGTATAGTTTCAAGAAACCAGAGTTTCCTGAGAACTGCAATTCAAAGGACACCTCAT
GAAGTAATGAGAAGAGAAAGCCACAGACTGTCTGCCCCTTCTTACCTTGTCAGGAGCCTAGCAGATGTCC
CTCGAGAGTGTGGCTCATCACAGTCATTTTTGACAGAAGTTAACTTTGCTGTTGAGAATGGAGACTCTGG
CTCCCGATACTTCTTCTCAGATAACTTTTTTGATGGACAGAGAAGGCGGCCACTTGGAGATCGTGCACAA
GAAGATTACAGATATTATGAATACAACCATGATCTCTTCCAGAGGATGCCACAGAGTCAGGGGAGGCACA
CTTCAGGTATTGGGAGAGTCACGGCTACATCTCTAGGGAATTTAACTAACCATGGATCTGAAGATTTACC
CCTTCCTCCTGGCTGGTCTGTGGACTGGACAATGAGAGGGAGAAAATACTACATAGATCATAACACAAAT
ACCACTCACTGGAGTCATCCCCTTGAACGAGAAGGACTTCCTCCTGGCTGGGAACGAGTAGAGTCATCAG
AATTTGGAACCTATTACGTGGATCACACCAATAAAAGGGCTCAGTACAGGCACCCCTGTGCTCCGAGTGT
ACCTCGGTATGATCAGCCTCCACCCATCACGTATCAGCCACAACAAACTGAAAGAAATCAGTCTCTCCTG
GTCCCTGCAAATCCCTACCATACTGCAGAAATTCCTGACTGGCTTCAGGTTTATGCCCGAGCCCCTGTGA
AATATGACCACATTCTGAAGTGGGAGCTCTTCCAGCTGGCTGACCTGGACACGTACCAGGGAATGCTGAA
GTTGCTCTTCATGAAGGAACTGGAGCAGATTGTGAAGTTGTACGAGGCCTACAGACAGGCTCTTCTCACT
GAGTTGGAAAACCGCAAGCAGAGGCAGCAGTGGTATGCCCAGCAGCATGGCAAGACGTTCTTAAGTTAAC
TTATCACAAGCCAAGTTTATAAGAGCTTTAAAATATTTTCAGATAAATGATTGCAAACAAGTTCTTTGGT
TAATAAAGGTAACTTACTATTTGGAAGTATAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4021056 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4021056 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14382 same embryo
 EMAGE:14385 same embryo
 EMAGE:14384 same embryo
 EurExpress:euxassay_004210 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS