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EMAGE:14847

Zmym2 zinc finger, MYM-type 2 ( MGI:1923257)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:14847 EMAGE:14847 EMAGE:14847 EMAGE:14847 EMAGE:14847
"Pseudo-wholemount" of euxassay_005825. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_005825_01 euxassay_005825_02 euxassay_005825_03 euxassay_005825_04
EMAGE:14847 EMAGE:14847 EMAGE:14847 EMAGE:14847 EMAGE:14847
euxassay_005825_05 euxassay_005825_06 euxassay_005825_07 euxassay_005825_08 euxassay_005825_09
EMAGE:14847 EMAGE:14847 EMAGE:14847 EMAGE:14847 EMAGE:14847
euxassay_005825_10 euxassay_005825_11 euxassay_005825_12 euxassay_005825_13 euxassay_005825_14
EMAGE:14847 EMAGE:14847 EMAGE:14847 EMAGE:14847 EMAGE:14847
euxassay_005825_15 euxassay_005825_16 euxassay_005825_17 euxassay_005825_18 euxassay_005825_19
EMAGE:14847 EMAGE:14847
euxassay_005825_20 euxassay_005825_21

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:14847Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
14847_wholemount_strong.wlz
14847_wholemount_moderate.wlz
14847_wholemount_weak.wlz
14847_wholemount_possible.wlz
14847_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:14847_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T35568
Entity Detected:Zmym2, zinc finger, MYM-type 2 ( MGI:1923257)
Sequence:sense strand is shown

>T35568
GGACAGCAGTGAGAAGATTCCTGCCACAGTTGAGGACCTCAAAAGCAAAGTTTCTTCAGATCCTCTTGAT
TCAGAATTGCTTACGATGACAGATATGATGACTGAAGAGGAGGGGAAAGCAGAGGCATCCAACATCAATA
GTGTAATTATTGAGACAGACATAATTGGCTCAGATCTTACAAAGAACTCTGACCCAGATATACAATCCAA
CATGCCCGATGTACCATATGAACCAGATTTGGATATTGAAATAGATTTCCCCAGAGCTGCAGAGGAGCTT
GATATGGAAAATGAGTTTTTATTACCACCTGTTTTTGGAGAAGAATACGAGGAGCAGCCCAGACCTCGAT
CTAAAAAAAAGGGAACCAAGAGGAAGGCTGTATCAGGATACCAGTCTCATGATGATAGTTCTGACAATTC
AGAATGCAGCTTTCCTTTCAAGTATACATACGGTGTAAATGCGTGGAAACATTGGGTCAAAACTAGGCAA
CTTGATGAAGATCTTCTGGTATTAGATGAGCTAAAATCCTCTAAATCAGTAAAGTTAAAAGAAGATCTAC
TCTCTCATACCACAGCTGAGCTTAACTATGGGTTAGCCCATTTTGTCAATGAGATCAGACGACCAAATGG
AGAGAATTATGCACCTGACAGCATCTATTATCTATGCCTTGGTATACAGGAGTACTTATGTGGTAGTAAT
CGAAAGGACAACATATTTATTGATCCAGGATACCAGATGTTTGAGCAAGAACTGAATAAAATACTCCGAA
GTTGGCAACCAAGCATACTTCCAGATGGGTCAATTTTCTCTCGAGTTGAAGAAGACTATCTCTGGAGGA
Notes:The probe template was received by the EURExpress consortium as an aliquot of PCR product from the Allen Brain Atlas (originally amplified from wild type C57BL/6J mouse whole brain cDNA), and this was re-amplified using the gene-specific Allen Brain Atlas Primer Pair 71472. Forward Primer - name:071472_F_cDNA_Zfp198, sequence:GGACAGCAGTGAGAAGATTCCT; Reverse Primer - name:071472_N_SP6_cDNA_Zfp198, sequence:TCCTCCAGAGATAGTCTTCTTCA. The reverse primer contains a 5' extension containing an Sp6 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using Sp6 polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:14848 same embryo
 EMAGE:14845 same embryo
 EMAGE:14844 same embryo
 EMAGE:14846 same embryo
 EMAGE:14843 same embryo
 EurExpress:euxassay_005825 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS