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EMAGE:15065

Wdr13 WD repeat domain 13 ( MGI:1914661)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:15065 EMAGE:15065 EMAGE:15065 EMAGE:15065 EMAGE:15065
"Pseudo-wholemount" of euxassay_010219. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_010219_01 euxassay_010219_02 euxassay_010219_03 euxassay_010219_04
EMAGE:15065 EMAGE:15065 EMAGE:15065 EMAGE:15065 EMAGE:15065
euxassay_010219_05 euxassay_010219_06 euxassay_010219_07 euxassay_010219_08 euxassay_010219_09
EMAGE:15065 EMAGE:15065 EMAGE:15065 EMAGE:15065 EMAGE:15065
euxassay_010219_10 euxassay_010219_11 euxassay_010219_12 euxassay_010219_13 euxassay_010219_14
EMAGE:15065 EMAGE:15065 EMAGE:15065 EMAGE:15065 EMAGE:15065
euxassay_010219_15 euxassay_010219_16 euxassay_010219_17 euxassay_010219_18 euxassay_010219_19
EMAGE:15065 EMAGE:15065 EMAGE:15065 EMAGE:15065 EMAGE:15065
euxassay_010219_20 euxassay_010219_21 euxassay_010219_22 euxassay_010219_23 euxassay_010219_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:15065Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
15065_wholemount_strong.wlz
15065_wholemount_moderate.wlz
15065_wholemount_weak.wlz
15065_wholemount_possible.wlz
15065_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:15065_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T37211
Entity Detected:Wdr13, WD repeat domain 13 ( MGI:1914661)
Sequence:sense strand is shown

>T37211
CTGACAGAAATTCCTACCCCTGTGGGCTGGCATCCCAATAGAGGCAAGCACATGGGAGACGAAAGTACAG
CCATTCCTTGGTGTAGAATTTGCTTTATAATTTTTCAACTTTATAAATTTTTGACCTTCCAGTGGTAGCG
AACCACACGCATATACCCAGTTCTGGTTTTCTCCTTTCAGTATGGTGTTCAGTAAATTATGTGAGCTAGT
CACTTTGTTATAAAATAGACTTTGCATTAGGTAAGTTTGCCTAACTGTAGAATAATGTCAGCGTTGTGGG
CACATTTAAGGTAGGTGACACTAAGCTAGGGTGTTCGGTAGGTTAGGTATATTTATGCATTTTCAACATA
AGACAGTTCAAGACAGATTTGTTGGGGTCTAACCCCGTGTGATGAAGTCACATCTGTATATAATAGAGTT
AAAGATGAGTGCTAGGAAGAAAAGCAAAGGGCCAGATGAGCTTGCACAAAAGGGAGGGGCAAAGTCATCA
GGAAGAGTGTTCCCAACCAGATGACAGTTTTAAAGATCTGAGTGAAATAGAGCCTGGAATAATGTGATTG
GGCGGAGTGTATGAGATGATGGGAGACAGGTCTTTGGGACATCTTGGGCCATAGCAAGGAAGGAAGCTTT
CCTTATTCCCTGAGTGAGGAAGGTGAGGAAGGCTCAGACAGCAGTAGGGAAATTAGGTGCAGAATGTTAA
GTTCAACCACGGGGCTTTCACCAGGTTAGGTTATCAAACTCCCCAACATTGGCAGCTACTGTTTGGGTGG
ACCCCACACTTGCCTGTGCGTTGAGTTGTGTCCCACAAGCAGTGAGCAGAAGTGTCGAGTTCTTGGAGCT
AGATTAGCATGCATACAGCCATGAACTCTGGGGCTGAGCCACAGTTCCTGCTGTGGGGTGGAAGAAACAG
GAAATCTCTAAGCTCACCCCTGTCTCCTGCCATGTCTATCTGGG
Notes:The probe template was received by the EURExpress consortium as an aliquot of PCR product from the Allen Brain Atlas (originally amplified from wild type C57BL/6J mouse whole brain cDNA), and this was re-amplified using the gene-specific Allen Brain Atlas Primer Pair 96909. Forward Primer - name:096909_F_cDNA_Wdr13, sequence:CTGACAGAAATTCCTACCCCTG; Reverse Primer - name:096909_N_SP6_cDNA_Wdr13, sequence:CCCAGATAGACATGGCAGGAG. The reverse primer contains a 5' extension containing an Sp6 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using Sp6 polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:15067 same embryo
 EMAGE:15064 same embryo
 EMAGE:15063 same embryo
 EMAGE:15068 same embryo
 EMAGE:15066 same embryo
 EurExpress:euxassay_010219 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS