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EMAGE:15322

Heatr2 HEAT repeat containing 2 ( MGI:3616079)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:15322 EMAGE:15322 EMAGE:15322 EMAGE:15322 EMAGE:15322
"Pseudo-wholemount" of euxassay_010486. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_010486_01 euxassay_010486_02 euxassay_010486_03 euxassay_010486_04
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euxassay_010486_05 euxassay_010486_06 euxassay_010486_07 euxassay_010486_08 euxassay_010486_09
EMAGE:15322 EMAGE:15322 EMAGE:15322 EMAGE:15322 EMAGE:15322
euxassay_010486_10 euxassay_010486_11 euxassay_010486_12 euxassay_010486_13 euxassay_010486_14
EMAGE:15322 EMAGE:15322 EMAGE:15322 EMAGE:15322 EMAGE:15322
euxassay_010486_15 euxassay_010486_16 euxassay_010486_17 euxassay_010486_18 euxassay_010486_19
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euxassay_010486_20 euxassay_010486_21

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T30485
Entity Detected:Heatr2, HEAT repeat containing 2 ( MGI:3616079)
Sequence:sense strand is shown

>T30485
TGACATCCTAGCCCCCAACCTGCAGTGGCATGCGGGGAGGACAGCTGCAGCCATCCGGACGGCTGCTATA
TCCTGCCTGTGGGCACTCATCAGCAGTGACATCTTATCGGCCAAGCAGGTGCAAGAGGCACAAGAGACCC
TGATGCCACAAGTGCTGGCTACGCTGGAGGACGACTCCCAGACCACACGCCTGATGTCCTGCCGCATCAT
CAACATGTTCCTCAAGAATTCAGGGGACACCATGGAGCCAGAGAAATTCCTCAAGGTCTATCCTGAGCTC
TTGAAGCGCCTAGATGATGTCTCCAATGATGTGAGGATGGCAGCTGCTTCTGCCTTGCTCACCTGGCTCA
AGTGCATCGAGAGCTTGGATGGGAAGTCCGCCTATCAGAGCAGCGTTCAGTTCCTGTACCGGGAGCTGCT
GGTCCACCTGGATGACCCAGAGAGTGCCATTCAAGACACCGTCCTAGAAGTCCTCAAGGAGGGCAGCGTC
CTGTTCCCAGATGTGCTGGTGCGGGAGACGGAGGCTGTCGTCCACAAACACCGCTCAGCTACCTACTGCG
AGCAGCTGCTGCAGCACATGCAGACCATGGCCGCTGCTCGGTGACTGTGTGCATCAGCTACTGAAGGCAG
ACAGTGGTGGCCTGCAGACCTCGCACTTGAGACACTGTGTCCATGGCCTCGGGCCATCCTTGGGCCCCCA
GATGGTGCTTGAACATCAGCTTCTGTGTTTCCTAAGCAGATTTCTGGGGTTTTGTAACACACATACACAC
ACACACACACACACACACACACACACACACACACACGCCAGCTTCCCAATTAGCTGCTTGAACATAATGT
TTTTAAATTACAAGCCCCAGGGGTCCTGGGCTGCTTTCAGATTCACCATAATGCTCTTCACATTGCAGGA
AAGCCAAAGGATTATAAAACAACCAACCATCCACTTCCTCTGGGCTCTGTCCCATCA
Notes:The probe template was received by the EURExpress consortium as an aliquot of PCR product from the Allen Brain Atlas (originally amplified from the plasmid IMAGE:30047784), and this was re-amplified using the gene-specific Allen Brain Atlas Primer Pair 58883. Forward Primer - name:058883_F_IRAV107_h04_MGC60818, sequence:TGACATCCTAGCCCCCAA; Reverse Primer - name:058883_R_SP6_IRAV107_h04_MGC60818, sequence:ATGATGGGACAGAGCCCA. The reverse primer contains a 5' extension containing an SP6 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using SP6 polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:15318 same embryo
 EMAGE:15321 same embryo
 EMAGE:15320 same embryo
 EMAGE:15319 same embryo
 EMAGE:15317 same embryo
 EurExpress:euxassay_010486 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS