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EMAGE:17142

Slc17a3 solute carrier family 17 (sodium phosphate), member 3 ( MGI:2389216)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17142
euxassay_001538_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17142Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17142_wholemount_strong.wlz
17142_wholemount_moderate.wlz
17142_wholemount_weak.wlz
17142_wholemount_possible.wlz
17142_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17142_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: one star
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4532
Entity Detected:Slc17a3, solute carrier family 17 (sodium phosphate), member 3 ( MGI:2389216)
Sequence:sense strand is shown

>T4532
AGGAAACACAGGAAGGCCTACCTCAGTCACTAAGTTGAAACACTAATTACCCAGAAAGAAAAAAACCACA
ATGGCCACAGTGGTAGAGATGAGCCCTACAAGTGAGCAGAGTGAGTTCGTCCTAGGTACACCAGTGAACA
AGAAGACCCCTGCCCTGAAAGTCCCGAGTTTATGTTCCATGCGCTATGGAATCGCCTTCGTCACACATTT
CTGCAATTTCACACTGATGGCGCAGAATTCTATTATAAGCATCACCATGGTAGCCATGGTCAACAACACC
GACCACCCACCCCACCTCAATAGCTCTACTGAACAGCTTCCTGCGGGTTTAAGCGGTGATCAGCATGAAG
CCTCAAAGCATCTTCCTATAAAGGCCCCTGTGTATAACTGGAGTCCTCAAACTCAAGGAATCATCTTCAG
CTCTGTCCAGTATGGCATGATACTGATGCAAGGTCCTGGAGGATACTTGGCAGGGAAAATAGGAACAAAG
AAAGTGGTTGGAATTGCTCTGCTTGGATCTTCATTACTCACTCTCTGCATCCCACTGACTGCCAATCTTG
GACTAGTTTTTTTCCTGGCAACTCGAGCAGTTCAAGGCTTAATGCAGGGCACTGGATATGGGGGACAGTT
TGCACTCTGGCAGAAATGGGCTCCTCCGAATGAGCGCAGCCGACTCTGCACCATTGCCTTGTCAGGAATG
ACATTGGGAATCTTTACTGTCCTCCTTGTGGGCGGCATCATTAGTGAAGCCCTTGGGTGGCCCTTTGTCT
TCTATAGTTTTGGAGGTGGTGGTGTGCTCTGCAGCCTTCTCTGGTTCATTCTGATTTATGATGACCCTGT
CTCTCACCCATGGATAAGTGGCCCAGAAAGAGAATATATTTTATCCTCTCTGAACCAACAGTTCAGCTCA
GAAGAGCAGCCACTTCCCATCAAAGCTATGCTCAAATCTCTGCCTCTCTGGTCCATGTGTCTCTGCACTA
TGACCCATCAGTGGCTTGTTAACACCTTTATAATGTACACTCCAACCTACATCAGTTCTGTATTCAAAGT
TAACATCAGAGACAATGGGTTCCTGTCTTCTCTTCCCTTTATTGTTGCCTGGGTCCTTGGTATCCTGGGA
GGCTGGCTGGCAGATTTTCTACTGAGCAAGAATTTTAGGCTCATAACTGTGAGAAAATTCATCACACTTT
TAGGAAATGCTCCTCCTGCAGCCCTCGTTGCGGCTCTGCCCTATATCCAATCCAGCTATATTACAACAAT
TATATTTCTGACAATTTCCTGTGGACTGTGCCCTCTATCTCAGGCAGGAATCTATATTAATGCGTTAGAC
ATTGCTCCAAGGTATGCCAGCTTTCTCATGGGAACATCAAGAGGATTGGCACATTCATCGGCTGTGCTGG
TACCCATTGTTGCTGGCTTTTTCCTCAGCCAGGACTCTGAATTCGGGTGGAGGAATTTCTTTTTTGTAGT
GTTTGCAGTTAACCTACTTGGCTTAATCATCTACCTCGTGTTTGGGAAAGCAGATGTTCAAGAATGGGCT
AGAGAGAGGAAGCTCACTCGTTTGTGAAGCTGTCCCACTTGCTGTAAAGAAGTCATTACATACGCTGGCT
CCTCTGTGGGAAGACCTTCATGAAAAATGATGTCAGATATTTTCCCCCTTTCACCCAGACTTCTTTTGAA
GAAAATATGAGAGGAATAAAACATCGAGTAAAATGATAAGAAGGGACCAGGTTGTCATCTTTGAATCAAG
AATTTGGTGCTGACATGGTAGTTTCCATTTTTTTAAGGGCCAAAGTTTATGGACCCTTGGTCCAGAGCGG
TAATCTTTACTAGAGAAATTATTTATTTTCTATTTGTCAGGTTGAATATTCATTTCTCGTTATGCCTGTG
GTACTGGAAGAAGAGTGAGCATTCTTTGACTGGCTTTCACTCCTAGTCTGCAGTTTCTGTTTCCTGGCTT
GGCACTGACACATGTTCCACACATGGTCCATTCTTCTTCACTGTGCTCAGGCTACTGGCGGATGAGTTGC
GTGCCTTGTCTACTGGCTTCAGCCAGATTTTTGATGGAGAAATGAAAATGTAGTCTGAGGAACTTAGCAC
AGAGGGTCACTGCAGTCCCTGGCCCTGAGAGGCAACCCCCTTGTGTGTTCTGGTAACTTCTTCCCTCTAT
TTGTTATTTTTGTCTTCGCTTGTGCCATCTCTGTTATTCTCTAGAACCTGTTATGGTTTTCTTGCCCTTT
GCCTGATCCTGTGCAAATGATCTTTCCACTGTCCTGAAACTGCCTAGTGTGGCTGTCATCCCTCTTCTGT
GAGATATGCCTAATTTGTGGTTAAATCACTCATAAGGATGGAAAGTAAAACCGACTTAGCGTTTTGTAAA
GTAATGGTTTGTAGGTGTCTGTGGGTCACACCAAGTTCAGAGACCCAGGACAGCATTGAGAACTGTTCCC
CATGCTAACCTTTACTGTCTATGACAGAGATCACTGCCCTCAAATCATATCCTACAGAGGTGGTGTAATA
CATTCTGAGTACAGATTAGGGCAAGATTAGAGAGGCCAACCATGAACAAACACAGCAATGACTGTGATCT
TGGTATGAGCTCTGATCTGTCTGTTGGGACACTAGAGTAAGTTAAATATGGTTTCCTTCTATTGTGCAGA
ATCAGGTGTAGTAGCAGAGGGACAGAAACGGGACACAGATGAAGATTTGCCATTCCATACAAAAAAACTC
TGAGAAGGTCTCATGTATGAAGCAATTCCAGGGGTACATATTAAATGGACAACCCTTCTTCTACAAAATC
ATAAAAGCAGGAAACAGGATGCATTCTAAAGGGAGTACCCTGTCTGCATATTCATAAAAAAGCACAAAGC
ACAAAATTAGAGGAAGGTGTGTGGCTAATGCATGTAGTGTTCCTGTGTTATGGGAGAGAATTTGAGAACA
TTATATAAGCAGTGAAGTAGGGCTCATAGCAATAGCTACATGGACAGATCTTTCTAGATGGAGCATTTTC
CTAAAATTTCAGAATTAGGATGACACGTCAAATGATGATCTGTATGCTGGTCTTTAAAACAGCAGTTTTA
GGGACTGGAATAAGGCAGGACACATTGAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4973620 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4973620 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_001538 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS