EMAGE mouse gene expression spatial database

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EMAGE:17245

Slc17a7 solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7 ( MGI:1920211)
TS23 (14.5 dpc)
in situ hybridisation

Data Images


euxassay_001627_01	euxassay_001627_02	euxassay_001627_03	euxassay_001627_04	euxassay_001627_05

euxassay_001627_06	euxassay_001627_07	euxassay_001627_08	euxassay_001627_09	euxassay_001627_10

euxassay_001627_11	euxassay_001627_12	euxassay_001627_13	euxassay_001627_14	euxassay_001627_15

euxassay_001627_16	euxassay_001627_17	euxassay_001627_18	euxassay_001627_19	euxassay_001627_20

euxassay_001627_21	euxassay_001627_22	euxassay_001627_23

View assay images:
Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

17245_wholemount_strong.wlz

17245_wholemount_moderate.wlz

17245_wholemount_weak.wlz

17245_wholemount_possible.wlz

17245_wholemount_not_detected.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:17245_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Annotation Validation:

spatial mapping by EMAGE editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	T5643
Entity Detected:	Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7 ( MGI:1920211)
Sequence:	sense strand is shown >T5643 TGGGGATATTCAGGGAGGGGATACTGAGGTAAGCAAGCAAGTAGAACTGAGCTTCTAGGCAGCAGCGCCT GTAGCTAAAGTGGTAGGGCAGGCCCTAGCAACATAGAAGGGTGGAGCTCCACTGAGCTCTGATTGGTAGA TTTGGGCAGAGGGCGGGGCATCTTGTTGCTGATTGGCTAAGGAGCTAAGTCTATGGGTGCTGATTGGTAG AGGGTAGAGTCTGGGGGGCATCTAGTTTGATGTGTATTTTGACCCACAGAAAGCCCAGTTCAACTGGGAT CCAGAGACTGTCGGCCTCATACATGGCTCCTTTTTCTGGGGCTACATTGTCACTCAGATTCCTGGAGGAT TTATCTGCCAAAAATTCGCAGCCAACAGGGTCTTTGGCTTTGCCATTGTGGCTACCTCCACCCTAAACAT GTTGATCCCTTCAGCAGCCCGCGTTCACTATGGCTGTGTCATCTTCGTGAGGATCCTTCAGGGATTGGTG GAGGGGGTCACATACCCTGCTTGCCATGGCATCTGGAGCAAATGGGCCCCTCCCTTAGAACGGAGTCGGC TGGCAACGACAGCCTTTTGCGGTTCCTATGCTGGGGCGGTGGTTGCCATGCCCTTGGCTGGGGTCCTTGT GCAGTATTCAGGATGGAGTTCTGTCTTCTATGTCTATGGCAGCTTCGGGATCTTTTGGTACCTGTTCTGG TTGCTTGTCTCCTATGAGTCACCGGCACTGCACCCCAGCATCTCTGAGGAGGAGCGCAAATACATTGAGG ATGCCATCGGGGAGAGCGCCAAGCTCATGAACCCTGTTACGAAGTTTAACACACCCTGGAGGCGCTTCTT TACGTCCATGCCCGTCTATGCCATCATCGTTGCGAACTTTTGCCGCAGCTGGACCTTCTACCTGCTCCTC ATCTCTCAGCCCGCCTACTTTGAAGAAGTGTTCGGCTTTGAGATCAGCAAGGTGGGGCTGGTGTCGGCGC TGCCTCACCTTGTCATGACCATCATCGTACCCATTGGAGGCCAGATCGCTGACTTTTTGCGCAGTCGTCA CATAATGTCCACTACCAACGTGCGAAAGCTCATGAACTGCGGGGGTTTCGGGATGGAAGCCACGCTGCTG CTGGTGGTCGGATACTCGCACTCCAAGGGCGTGGCCATCTCCTTCCTGGTCCTGGCTGTGGGCTTCAGTG GCTTTGCCATCTCTGGGTTTAACGTGAACCACTTGGACATCGCCCCTCGCTATGCCAGCATCTTGATGGG CATTTCCAATGGCGTGGGCACACTGTCTGGGATGGTGTGCCCCATCATCGTGGGTGCAATGACCAAGCAC AAGACGCGGGAGGAGTGGCAGTACGTGTTCCTCATAGCCTCCCTGGTGCACTACGGCGGTGTCATCTTCT ATGGGGTCTTTGCTTCGGGAGAGAAGCAGCCGTGGGCAGAGCCGGAGGAGATGAGCGAGGAGAAGTGTGG CTTTGTTGGCCACGACCAGCTGGCTGGCAGTGACGAAAGTGAAATGGAGGACGAGGCTGAGCCCCCAGGG GCGCCCCCCGCGCCGCCTCCGTCCTACGGGGCCACACACAGCACAGTGCAGCCTCCGAGGCCCCCGCCCC CTGTCCGGGACTACTGACCACGGGCCTCCCACTGTGGGGCAGTTTCCAGGACTTCCACTCCATACACCTC TAGCCTGAGCGGCAGTGTCGAGGAACCCCACTCCTCCCCTGCCTCAGGCTTAAGATGCAAGTCCTCCCTT GTTCCCAGTGCTGTCCGACCAGCCCTCTTTCCCTCTCAACTGCCTCCTGCGGGGGGTGAAGCTGCACACT AGCAGTTTCAAGGATACCCAGACTCCCCTGAAAGTCGTTCTCCGCTTGTTTCTGCCTGTGTGGGCTCAAA TCTCCCCTTTGAGGGCTTTATTTGGAGGGACAGTTCAACCTCTTCCTCTCTTGTGGTTTTGAGGTTTCAC CCCTTCCCCCAAGACCCCAGGGATTCTCAGGCTACCCCGAGATTATTCAGGTGGTCCCCTACTCAGAAGA CTTCATGGTCGTCCTCTATTAGTTTCAAGGCTCGCCTAACCAATTCTACATTTTTCCAAGCTGGTTTAAC CTAACCACCAATGCCGCCGTTCCCAGGACTGATTCTCACCAGCGTTTCTGAGGGAAAATGGCGGTTTCAA GTCCCCCCACCCCCCTTTTCTTCCCTCGTCCCCTCACCAGCACACTTTGCCGGGCCTTGACCTTAGCTTA GTACAATCATTGTCCAGGGAAATGGCCAAAATGGCTCTGCTCACCCCGTGCTCTTTTTCTGACTCAGTTT TCAGGTCTCAGTAGTGGCTGCCCAAAGCTATTAATTCAGCGGCTCGAGGCCACCTCTTCCTCCCCGTGGT GGTTTCAGGATCCCCCTCGCCCCCCCCCCCCCAAATCCTTGCACTTTATTCTCCTGGGTGGTTCCAGGCC GCCCTCGGTTTCTCAGTGGCCATTTGTTGTGTGTCCCTCAGGGGCTAAATGATTCCAAATCTGGGGTGCT TCCCCTCATAGACACCCCTCTCTCAACGTAGAAATCTGGGTGGGGGTGAGGTGTGTGAGAGAAGTTACAG AATCCCAGGAAAGGGAGCGGGGCTGGGAGGAGAGGGTTGTTCCTGGGGCAGGGTCGTGTCTTGGTGTCTG TCTCTGTGACGTAAATCCTGCCCTGCCCCACCCCACTCCCAATAAACGCTCTGGTGTACGGAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:	The probe template was PCR amplified from IMAGE:6494471 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6494471 which was retrieved directly from NCBI.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Strain:	C57BL/6
Age:	14.5 dpc
Theiler Stage:	TS23
Mutations:	none (wild-type)
Preparation:	section

Procedures

Fixation:	none
Embedding:	cryosection (OCT)
Staining procedure:	alkaline phosphatase + NBT/BCIP

General Information

Authors:	Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:	Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	screen
References:	[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:	EMAGE:17244 same embryo
	EMAGE:17247 same embryo
	EMAGE:17243 same embryo
	EMAGE:17246 same embryo
	EurExpress:euxassay_001627 same experiment
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source