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EMAGE:17280

Tmem185b transmembrane protein 185B ( MGI:1917634)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17280
euxassay_003669_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17280Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17280_wholemount_strong.wlz
17280_wholemount_moderate.wlz
17280_wholemount_weak.wlz
17280_wholemount_possible.wlz
17280_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17280_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5694
Entity Detected:Tmem185b, transmembrane protein 185B ( MGI:1917634)
Sequence:sense strand is shown

>T5694
GTCCTCCGAAGGTCTCGGCCAGCTCACAGGCAGCGGGTCTGCGGGTCGCCGAGTCCGCAGCGCGCCAGGT
CCCATCCGACTCCGCACGCAACGCGGCGTCGGCCTCGTGGCTGCGAAATGAAGGCAGACGGCGTGAGCAT
CCACTGAAGCCTGAGCTACGGGGTTGGGGCAGTGTCCCCGGCGTAGGCACCGTACCGTTCGCGGCCAGCG
CACGCTGTGCCCTCGGCTCGCTTCCGGCCGGGCCACGTGACTGCTCGCACGTGTTCCGGCCCCTCGGAGC
TGCGGTCTGGAGCCTCTAACACGCAGCGGGCGGATGCCCATCTAGAGGCAGTACAGCCTTCGCCATGAAC
CCCAGGGGCCTGTTCCAGGACTTCAACCCCAGTAAGTTCCTCATTTATGCCTGCTTGCTACTCTTCTCCG
TGCTGCTGCCCCTGCGCCTGGACGGCATCATCCAGTGGAGCTACTGGGCAGTCTTCGCCCCCATCTGGCT
GTGGAAGCTCCTGGTCATCGTGGGCGCCTCGGTGGGTGCGGGCGTGTGGGCCCGCAACCCACGCTACCGT
ACAGAGGGGGAAGCCTGCGTGGAATTCAAAGCCATGCTTATCGCCGTGGGCATCCACCTGCTACTACTCA
TGTTTGAGATACTAGTCTGCGACAGGGTGGAGAGGGGCACCCACTTTTGGCTGCTGGTCTTCATGCCACT
CTTCTTCGTTTCCCCTGTGTCCGTGGCCGCCTGTGTCTGGGGCTTCCGACACGACAGGTCTTTGGAACTG
GAGATCCTGTGCTCTGTCAACATCCTGCAGTTCATCTTCATCGCCCTGAGGCTGGACAGGATTATCCACT
GGCCGTGGCTAGTGGTGTTCGTGCCCCTGTGGATCCTCATGTCATTCCTCTGCCTGGTAGTTCTCTATTA
CATCGTGTGGTCCCTCCTATTCCTGCGGTCCCTGGATGTGGTTGCAGAGCAGCGAAGAACACATGTGACC
ATGGCCATCAGCTGGATCACCATTGTCGTGCCCCTGCTCATTTTTGAGGTCCTGCTAGTTCACAGACTGG
ATGACCACAATACGTTCTCTTACATTTCCATTTTCATCCCGCTTTGGCTCTCATTACTGACTTTGATGGC
TACAACGTTCAGGCGGAAAGGGGGCAATCATTGGTGGTTTGGGATTCGCAGGGATTTCTGTCAGTTTCTA
CTAGAAGTTTTTCCGTTTTTAAGAGAATATGGAAATATCTCTTACGATCTCCATCACGAAGACAGTGAAG
ATGCTGAAGACGCATCGGTGTCAGAAGCTCCGAAAATTGCTCCAATGTTTGGAAAGAAGGCGCGGGTAGT
TATAACACAGAGCCCTGGGAAATATGTGCCTCCACCTCCCAAGTTAAACATTGATATGCCAGACTAAACT
CACAGGCTGGGCCTTTCAGTGAAATAAGAACCATATACCCTTGAATTCCACTTTGCTTTTTTCTTGTGTT
CATCCAGTCCTGGAATTGGAAACAGGTCCCCCTCATTTTACATCCACACTGAGACAGAAGTCTCTTGCAG
TGGTCATTGTGTGCCGTAGGCAGAAGGGGGAAACTGTAGGACTGTGGGATGTGTACATAATGTGCAAGAG
AACTTGCTTTCCAGGCCCACATCTTGTGAGCTAGCCAAAGGTGGTAAATCGAATTGTTTCTAGGCCTTCA
AAAGACCTGAAAACTACATAGCTGTTTGTTTTAAAGTGCTACTTATGCCTACCAAAAGTATTGTTTAAAA
AGTATTTTTATACACTGCTAGTCTAAAATTGTATTTTAGATTGCACCCATTGTGACAAAATGGCAAATGT
ACCAAATTGTCCCCTCCCACTGTTCCCTAAACCTCATTGTTGGTGTTTCTAGTGCTCCTACTGTTCAAAT
AGTTGTTTTCTGTGGGCTTTGCGGACACAGGTCTCTAGTATTCTAATAGATGAATTTTCTAATGGAGTGA
ATCTGCATATATTAGTATTTATATGAATGTTTTAGCAGTGTTATCTGTGTTGATTGTAGTTCTTGGCAGT
AATGTATTGTGTTAAAGTATTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:2646072 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:2646072 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17282 same embryo
 EMAGE:17281 same embryo
 EurExpress:euxassay_003669 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS