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EMAGE:17281

Eef2k eukaryotic elongation factor-2 kinase ( MGI:1195261)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17281 EMAGE:17281 EMAGE:17281 EMAGE:17281 EMAGE:17281
"Pseudo-wholemount" of euxassay_003683. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_003683_01 euxassay_003683_02 euxassay_003683_03 euxassay_003683_04
EMAGE:17281 EMAGE:17281 EMAGE:17281 EMAGE:17281 EMAGE:17281
euxassay_003683_05 euxassay_003683_06 euxassay_003683_07 euxassay_003683_08 euxassay_003683_09
EMAGE:17281 EMAGE:17281 EMAGE:17281 EMAGE:17281 EMAGE:17281
euxassay_003683_10 euxassay_003683_11 euxassay_003683_12 euxassay_003683_13 euxassay_003683_14
EMAGE:17281 EMAGE:17281 EMAGE:17281 EMAGE:17281 EMAGE:17281
euxassay_003683_15 euxassay_003683_16 euxassay_003683_17 euxassay_003683_18 euxassay_003683_19
EMAGE:17281 EMAGE:17281 EMAGE:17281
euxassay_003683_20 euxassay_003683_21 euxassay_003683_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17281Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17281_wholemount_strong.wlz
17281_wholemount_moderate.wlz
17281_wholemount_weak.wlz
17281_wholemount_possible.wlz
17281_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17281_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5696
Entity Detected:Eef2k, eukaryotic elongation factor-2 kinase ( MGI:1195261)
Sequence:sense strand is shown

>T5696
GGCAGCAGCCCCAACTCCAGCCGGTGCTCGGCTCCAGCGCTCCGACGTCTTCAGGCGCCCCACTGCGGCT
GCGGGCCTGGCTCTCTGTCGCCTGCGCTTTGTACCGGGGATTCTCCTCCCTCCCTGCACCCTGGAGCGCC
CGGCCGCCAGCCTTTGCCAGCTCCTTGGGATCCTTGCGGCCGTGGGCAGCAGCTGTCGCGCCTGCCACAC
TGTGGGAGGACCATCCTTGCTGCACGTGCGCAGTAACTCTGGCTGCACAGCGGAGCCCCCGGATAACACG
GTCGCCCCCGCAACATGGCAGACGAAGACCTCATCTTCTGCCTGGAAGGTGTTGACGGTGGCAGGTGCTC
CCGAGCTGGCCACAATGCGGACTCTGACACAGACAGTGACGATGATGAGGGCTATTTCATCTGCCCCATC
ACTGATGACCACATGTCCAATCAGAATGTCAGCTCCAAAGTCCAGAGCTACTATAGCAACCTAACAAAAA
CAGAGTGCGGCTCCACAGGGTCACCAGCCAGCTCCTTCCACTTCAAGGAAGCCTGGAAGCATGCGATCGA
GAAAGCCAAGCACATGCCTGACCCCTGGGCTGAATTCCATCTCGAGGACATCGCCACAGAACATGCTACT
CGGCACAGGTACAACGCTGTCACCGGGGAATGGCTGAAAGACGAGGTTCTGATCAAGATGGCGTCTCAGC
CCTTCGGCCGTGGAGCAATGAGGGAGTGCTTCAGGACGAAGAAACTCTCCAACTTCTTGCACGCCCAGCA
ATGGAAGGGGGCCTCCAACTACGTGGCCAAGCGCTACATCGAGCCGGTGGACAGGAGCGTGTACTTTGAG
GATGTGCAGCTCCAGATGGAGGCGAAGCTCTGGGGGGAGGATTACAATCGGCACAAGCCCCCCAAGCAGG
TGGATATCATGCAGATGTGCATCATTGAGCTAAAGGACAGACCAGGCCAGCCCCTCTTCCACTTGGAGCA
CTACATTGAGGGCAAGTACATCAAGTACAATTCCAACTCAGGCTTTGTCCGTGATGACAACATCCGACTA
ACCCCACAGGCCTTCAGCCATTTCACATTTGAGCGTTCTGGTCATCAGCTGATTGTAGTGGACATCCAGG
GTGTGGGTGACCTTTATACCGACCCACAGATCCACACTGAGAAAGGCACTGACTTTGGAGATGGTAACCT
TGGTGTCCGGGGAATGGCTCTCTTCTTCTACTCTCATGCCTGCAACCGGATTTGTCAGAGCATGGGCCTT
ACGCCCTTTGACCTCTCCCCACGGGAACAGGATGCGGTGAATCAGAGCACCAGGCTATTGCAATCAGCCA
AGACCATCTTGAGGGGGACAGAGGAGAAGTGTGGGAGTCCCCGCATAAGGACACTCTCTAGCAGCCGGCC
CCCTTTGCTCCTTCGCCTGTCAGAGAACTCCGGGGATGAGAACATGAGTGACGTGACCTTTGACTCTCTG
CCTTCCTCCCCGTCTTCAGCTACACCACACAGCCAGAAACTGGACCACCTCCATTGGCCAGTGTTTGGTG
ACCTCGATAACATGGGCCCTAGAGACCATGACCGCATGGACAATCACCGGGACTCTGAGAATAGTGGGGA
CAGTGGGTATCCAAGCGAGAAGCGAAGTGACCTGGATGATCCTGAGCCCCGAGAACACGGCCACTCCAAC
GGCAACCGAAGGCATGAATCTGACGAGGATAGCCTGGGCAGCTCTGGACGGGTCTGTGTGGAGACGTGGA
ACCTGCTCAATCCCTCCCGCCTGCACCTGCCGAGGCCCTCGGCCGTGGCCCTAGAAGTGCAGAGGCTAAA
TGCCCTGGACCTTGGAAGGAAAATCGGGAAGTCTGTTTTGGGGAAGGTCCATCTGGCCATGGTGCGATAC
CACGAGGGCGGGCGCTTCTGCGAGAAGGATGAGGAGTGGGATCGAGAGTCAGCCATCTTCCATCTGGAGC
ATGCAGCTGACCTGGGAGAACTGGAGGCCATCGTGGGCCTAGGCCTCATGTACTCTCAGCTGCCCCACCA
CATCCTGGCTGATGTCTCTCTGAAGGAGACAGAGGAGAACAAGACAAAAGGCTTTGATTACTTACTGAAG
GCGGCAGAAGCTGGTGACAGGCATTCCATGATTTTAGTGGCCCGAGCTTTTGACACTGGCCTGAACCTCA
GCCCAGACAGGTGTCAAGACTGGTCGGAAGCCTTGCACTGGTACAACACAGCCCTGGAGACAACAGACTG
CGATGAAGGCGGGGAGTACGATGGGATACAGGACGAGCCCCAGTACGCACTGCTGGCCAGGGAGGCGGAG
ATGCTGCTCACCGGGGGATTTGGACTGGACAAGAACCCCCAAAGATCAGGAGATTTGTACACCCAGGCAG
CTGAGGCAGCAATGGAAGCCATGAAGGGCCGGCTAGCCAACCAGTACTACGAGAAGGCGGAAGAGGCCTG
GGCCCAGATGGAGGAATAACTGCCCCACAGAATCACTGCCAAGGAGAAAGGCTGGGGAAGGGAGGATGGG
ACTCATTTCTAGGGAGGGGAGAAGCAGTTTTATTATGGTATAAACTCACTTTTGTATTCCGTTTTCTCAC
TCTTGATAGCCTTTGCAGCTGGCCGAGACATTATAACTGCCCTTTTAGTGGTGGTACTTTGGGGGAAGTG
GGGGGTTGAAGATGCAGCCTAATGAGTCTCTTCCCCGTCCTCCACCCCCCGGTTTTCCCTTTTTCATCCT
GAGATGTAAGCAAGTATCTTTCTGTCTGGATGATCAGACAGTATCAGGGCTTCTCTCGCCAGCCTTTGCA
GGCAGGACTCACATCTCAGGGTCTCCAGGCCATGTGCTGGGAAACCTTTCTATTGGCTTTCCACAATGGG
TCTTTCTTTCAGTTTTGAGAGAGGTATGTTGTTTGTTTGTTTGTTTCCTCCAGTGGATGTGAGATGGTTC
AATACCCAGGCTCCTTCATGCTGGGGGAGATAGTTGTATAACTCTTCCACTTAATGCCCTTCCACTGGAC
ATGTGATTCCTGGCATCCTTCTAAATTTTTTTTTTTTAGACCTGCTATGTAATATAGATTTTTCAAAAAC
AAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:2646503 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:2646503 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17280 same embryo
 EMAGE:17282 same embryo
 EurExpress:euxassay_003683 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS