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EMAGE:17293

Abhd14a abhydrolase domain containing 14A ( MGI:1915894)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17293
euxassay_003715_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17293Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17293_wholemount_strong.wlz
17293_wholemount_moderate.wlz
17293_wholemount_weak.wlz
17293_wholemount_possible.wlz
17293_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17293_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5714
Entity Detected:Abhd14a, abhydrolase domain containing 14A ( MGI:1915894)
Sequence:sense strand is shown

>T5714
GGTTACCAAGGAGGCTGTGCCACAGCCGCTAGGCTGTTTGGCAGTTGGTTCCGCCTAGGCCGGGCCCCGC
CTCACCGGAGCCTTTCTGGTCACTCCTGTCCACGCGTCTGCATCAGAACCCCTACAGTTGTCTAGTCTTG
GGCACCCAAGTTGCCATGGCGGAGGAGGAGGAAGAGTGTGCTCTTTCTGCACCTGGCTCCTGATTTTCTA
TCAGCACCGGAGGATCTGCTGCAGCCCACGCACAGCCTGACTTCGGAGCTAGGGAGTGAGGCCTGCAGAA
GAGTTCCACAGAGGTTCTATGGTACAGAAATTCATGAGCCGGTACCAGGCAGCCCTGCTGGGTCTAGGCT
TGCTGCTCGTGTTCCTCCTGTATATGGGCTTGCCTGGCCCACCCGAGCAGACTTCGCGACTCTGGAGAGG
CCCTAATGTCACAGTCCTGACTGGTCTCACCAGAGGCAACTCTCGAATCTTTTACCGAGAGGTGCTGCCA
ATCCAGCAGGCATGCAGGGCAGAAGTCGTGTTTCTCCATGGAAAAGCATTTAATTCCCACACATGGGAAC
AGCTGGGGACATTGCAGCTACTGTCAGAGAGGGGCTACCGGGCTGTGGCCATCGACCTTCCAGGTTTTGG
GAACTCAGCCCCTTCAGAGGAGGTGAGCACAGAGGCAGGCCGAGTGGAGTTGCTGGAGAGAGTGTTCCAG
GACCTACAGGTGCAGAATACTGTGTTGGTGAGCCCCTCGCTGAGTGGCAGCTATGCCCTGCCCTTCTTGA
TGCAAAACCACCACCAGCTACGTGGATTCGTGCCCATCGCACCCACCTACACCAGGAATTATGCACAGGA
ACAATTCAGGGCTGTGAAGACCCCAACTCTTATCCTGTATGGGGAACTGGACCACACCTTGGCTCGAGAG
TCACTTCAGCAGCTCCGCCACCTGCCCAACCACTCCATGGTGAAGCTGCGTGATGCAGGTCACGCCCGCT
ACCTCCATAAGCCAGAAGCCTTCCACCTCGCCCTTCTTGCCTTCCTTGACCATTTGCCTTGAGTGGACTC
ACCTCCCAGGATCGACCTCGAAGAGTCTAGACCCTCTCTCTCTCCTCTTCCAGGGTGGCAGTCCCTGGCT
GGGACTGGGGGACAGAGGATCAAGCCTAGCCAGGACCTTTGTATTTCATTTCACAAGCACAATAAAGAAA
AGCCTTTTTGTCTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:2647263 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:2647263 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17294 same embryo
 EMAGE:17295 same embryo
 EurExpress:euxassay_003715 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS