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EMAGE:17301

Rpl4 ribosomal protein L4 ( MGI:1915141)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17301 EMAGE:17301 EMAGE:17301 EMAGE:17301 EMAGE:17301
euxassay_003730_01 euxassay_003730_02 euxassay_003730_03 euxassay_003730_04 euxassay_003730_05
EMAGE:17301 EMAGE:17301 EMAGE:17301 EMAGE:17301 EMAGE:17301
euxassay_003730_06 euxassay_003730_07 euxassay_003730_08 euxassay_003730_09 euxassay_003730_10
EMAGE:17301 EMAGE:17301 EMAGE:17301 EMAGE:17301 EMAGE:17301
euxassay_003730_11 euxassay_003730_12 euxassay_003730_13 euxassay_003730_14 euxassay_003730_15
EMAGE:17301 EMAGE:17301 EMAGE:17301 EMAGE:17301 EMAGE:17301
euxassay_003730_16 euxassay_003730_17 euxassay_003730_18 euxassay_003730_19 euxassay_003730_20
EMAGE:17301 EMAGE:17301 EMAGE:17301
euxassay_003730_21 euxassay_003730_22 euxassay_003730_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17301Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17301_wholemount_strong.wlz
17301_wholemount_moderate.wlz
17301_wholemount_weak.wlz
17301_wholemount_possible.wlz
17301_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17301_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T5728
Entity Detected:Rpl4, ribosomal protein L4 ( MGI:1915141)
Sequence:sense strand is shown

>T5728
CAGCCGGGTAGAGAGGAGCGTGGCCTTCTCCTCTCCCCGTCATGGCTTGTGCCCGTCCCCTCATATCGGT
GTACTCCGAAAAGGGAGAGTCATCTGGCAAGAATGTCACTTTGCCAGCTGTGTTCAAAGCTCCCATTCGA
CCAGATATTGTGAACTTCGTTCACACCAACTTGAGGAAAAACAACAGACAGCCCTATGCCGTCAGTGAAT
TGGCAGGTCATCAGACCAGTGCTGAGTCTTGGGGTACTGGCAGAGCTGTGGCTCGAATTCCAAGAGTTCG
AGGTGGTGGGACCCACCGATCTGGCCAGGGTGCCTTTGGAAATATGTGTCGTGGGGGACGCATGTTTGCA
CCAACCAAAACCTGGCGTCGTTGGCACCGCAGAGTGAATACAACCCAAAAACGATATGCCATCTGTTCTG
CCCTGGCTGCCTCGGCCTTACCAGCTTTGGTGATGTCTAAAGGTCATCGTATTGAGGAGGTTCCTGAGCT
GCCGCTGGTGGTTGAAGATAAGGTTGAAGGTTACAAGAAGACCAAGGAGGCTGTTCAGCTGCTCAAGAAA
CTCAAAGCTTGGAATGACATCAAAAAGGTCTATGCCTCTCAGAGAATGAGAGCTGGCAAGGGCAAAATGA
GAAACCGACGGCGGATCCAGCGCAGGGGGCCCTGCATCATCTATAATGAAGATAATGGTATCATCAAGGC
CTTCCGCAACATCCCTGGTATTACTCTGCTTAATGTAAGCAAGCTGAACATTTTGAAACTGGCTCCTGGT
GGGCATGTGGGCCGTTTCTGCATCTGGACGGAGAGTGCTTTCCGGAAGTTGGATGAGCTGTATGGCACTT
GGCGGAAGGCTGCTTCCCTCAAGAGTAACTATAACCTGCCCATGCACAAGATGATGAACACCGACCTTAG
CAGAATCTTGAAAAGCCCAGAAATCCAAAGAGCCCTCCGAGCACCACGCAAGAAGATTCATCGCAGAGTC
TTGAAGAAGAATCCACTGAAGAACCTGAGAATCATGTTGAAGCTGAACCCTTACGCCAAGACTATGCGCA
GGAATACCATTCTTCGCCAGGCCAGAAATCACAAACTTCGTGTGAAAAAGCTGGAAGCAGCAGCTACTGC
ACTGGCAACCAAATCCGAGAAGGTTGTTCCAGAGAAGGGGACTGCAGACAAGAAGCCAGCGGTAGGCAAG
AAAGGAAAGAAGGTGGATGCCAAGAAGCAGAAGCCTGCAGGGAAAAAGGTGGTTGCCAAGAAACCAGCAG
AGAAGAAGCCTACTACAGAAGAAAAGAAGCCAGCTGCATAAACTATTAAAAATTGTTAAATTCCAGAGAG
CAAGTAGAGACCGCATATTTCAATAAATCAAACATGTGGTGACAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:2648518 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:2648518 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17303 same embryo
 EMAGE:17304 same embryo
 EMAGE:17306 same embryo
 EMAGE:17302 same embryo
 EMAGE:17305 same embryo
 EurExpress:euxassay_003730 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS