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EMAGE:17355

Crcp calcitonin gene-related peptide-receptor component protein ( MGI:1100818)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17355 EMAGE:17355 EMAGE:17355 EMAGE:17355 EMAGE:17355
"Pseudo-wholemount" of euxassay_003699. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_003699_01 euxassay_003699_02 euxassay_003699_03 euxassay_003699_04
EMAGE:17355 EMAGE:17355 EMAGE:17355 EMAGE:17355 EMAGE:17355
euxassay_003699_05 euxassay_003699_06 euxassay_003699_07 euxassay_003699_08 euxassay_003699_09
EMAGE:17355 EMAGE:17355 EMAGE:17355 EMAGE:17355 EMAGE:17355
euxassay_003699_10 euxassay_003699_11 euxassay_003699_12 euxassay_003699_13 euxassay_003699_14
EMAGE:17355 EMAGE:17355 EMAGE:17355 EMAGE:17355 EMAGE:17355
euxassay_003699_15 euxassay_003699_16 euxassay_003699_17 euxassay_003699_18 euxassay_003699_19
EMAGE:17355 EMAGE:17355 EMAGE:17355 EMAGE:17355 EMAGE:17355
euxassay_003699_20 euxassay_003699_21 euxassay_003699_22 euxassay_003699_23 euxassay_003699_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17355Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17355_wholemount_strong.wlz
17355_wholemount_moderate.wlz
17355_wholemount_weak.wlz
17355_wholemount_possible.wlz
17355_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17355_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6987
Entity Detected:Crcp, calcitonin gene-related peptide-receptor component protein ( MGI:1100818)
Sequence:sense strand is shown

>T6987
CCACGCGTCCGGCCGAGGCAGAGGCAACATGGAAGTGAAGGATGCGAACGCAGCACTGCTCAGCAACTAT
GAGGTGTTCCAGTTACTAACGGATCTCAAAGAGCAGCGGAAGGAGAGTGGGAAGAACAAGCATAGCGCTG
GGCAGCAGAACTTGAACGCCATCACCTATGAGACACTAAAGTACATATCAAAAACACCATGTAGGAACCA
GAGTCCAGCGATTGTCCAAGAATTCCTCACAGCAATGAAAAGCCACAAGCTGACCAAAGCGGAGAAGCTG
CAGCTGCTGAATCACAGGCCGATGACCGCGGTGGAGATCCAGCTGATGGTAGAAGAGAGTGAAGAACGGC
TCACAGAGGAGCAGATCGAAGCCCTCCTGCACACTGTCACTAGCATTCTGCCTGCAGGTCCAGAGGATGA
ACAGAGCAAAAGCACTAGCAATGACGTGGCTATGGAAGAGGAGGAGCCAGCATAGATGTGCAGCTGGCCA
AGTTGTTCGTGAAGCTCAAAGCTGCAGCAGCCATTTCCTGGATGTTCAGAGAACTCTTTATTTGGCCTGA
CCCCCTCTCTCAGTATGCCTGATCTCAGGATTTGTTGGGGAAAAAAAATCACAAAAATAAGATGAAAAGA
AATCTTTGTGCTTTGGGGTCAGAGCAGGGCAGGGGCTAAGATGGGGGAGCAGGACTGCAGCTGTCTGGGG
TAGAAAGGCTTGTGTGGCCTGTGCCGCACATGCACACAGTGGGAGCTCGTCAGGCGCTTTGATGACTGTT
GTAGGCAATGTCAGGCACTGCTGGGTAGAATGGAGCTGGGAGAACGGACTCAGATGGTCACCAGCTCTCA
GAGCTGCACACAGCTGCTCTAGGGGAAATGACCCAGAGCTTAGCTCACTGTAGAGGAATGTCCTTGGCGG
AATAGGAGATAAAACTCCAATCTGAGCCTAGCCTGGTGTACACACCTAATGTGCATGCATGTCACACACA
TACAAAGAAATTAGTCCAATTTCTGTGGCAAAACCCACAACTCTATAGCCTGGGTGAGTGACAAGAAAAA
GAGGCTTATCTTGACTCCTGGTTCCGGTCCAAGGTCAAAGGGCATCTGGATATGGCCCTCTTGTTGCCAG
AGTACCCAGGTAGCATAGGCTAGCATATTACAAAACACGAGAAGCGTTTGTTTTCAGAGTCTCTTGCAGC
CCACATTGACCTTGAATTTATTATGCGGTCCCTTCTGTCTGTCCTCATCAGACATCTTATGATTCTTCTG
CCTCAGCCTCCTTAATGCTTGGATTCAAAGTGTATGTCACTCACTTAGGAGGCGGAGGCCAGCCTGGTCC
ACAAAGCAAGTTCCATGCCAGCCAGCGCCACACAGACCCTGTCTCATAAAAATAAAAATAAACCAACAAA
AAACAGTAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3989860 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3989860 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17356 same embryo
 EMAGE:17357 same embryo
 EurExpress:euxassay_003699 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS