EMAGE mouse gene expression spatial database

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EMAGE:17372

Slc25a12 solute carrier family 25 (mitochondrial carrier, Aralar), member 12 ( MGI:1926080)
TS23 (14.5 dpc)
in situ hybridisation

Data Images


euxassay_003824_01	euxassay_003824_02	euxassay_003824_03	euxassay_003824_04	euxassay_003824_05

euxassay_003824_06	euxassay_003824_07	euxassay_003824_08	euxassay_003824_09	euxassay_003824_10

euxassay_003824_11	euxassay_003824_12	euxassay_003824_13	euxassay_003824_14	euxassay_003824_15

euxassay_003824_16	euxassay_003824_17	euxassay_003824_18	euxassay_003824_19	euxassay_003824_20

euxassay_003824_21	euxassay_003824_22	euxassay_003824_23	euxassay_003824_24

View assay images:
Expression pattern clarity:
Find spatially similar wholemount expression patterns:

Expression Pattern Description

Spatial Annotation:

Annotation colour key:

	strong
	moderate
	weak
	possible
	not detected

wholemount mapping

Download individual expression domains:

17372_wholemount_strong.wlz

17372_wholemount_moderate.wlz

17372_wholemount_weak.wlz

17372_wholemount_possible.wlz

17372_wholemount_not_detected.wlz

(what is wlz format?)

Download all expression domains:

EMAGE:17372_all_domains.zip

Find spatially similar wholemount expression patterns:

EMAGE spatially similar wholemount patterns

Morphological match to the template:

Annotation Validation:

spatial mapping by EMAGE editor

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	T7752
Entity Detected:	Slc25a12, solute carrier family 25 (mitochondrial carrier, Aralar), member 12 ( MGI:1926080)
Sequence:	sense strand is shown >T7752 CGGCTTCCGAGCACAGCATGGCGGTCAAGGTGCATACAACCAAACGAGGTGATCCTCATGAGCTGAGAAA CATATTCCTCCAGTATGCCAGCACTGAGGTGGACGGGGAGCATTACATGACTCCAGAAGACTTCGTTCAA CGCTATCTTGGCCTGTACAACGATCCAAACAGCAACCCAAAGATTGTGCAGCTCTTGGCAGGAGTAGCTG ATCAAACCAAGGATGGGTTGATCTCCTATCAAGAGTTTTTGGCATTTGAATCTGTTCTATGTGCTCCAGA TTCCATGTTCATAGTGGCTTTCCAACTGTTTGACAAGAGCGGAAATGGAGAGGTGACATTTGAAAATGTC AAGGAGATTTTTGGGCAGACTATTATCCATCACCACATCCCTTTTAACTGGGACTGCGAGTTCATCCGGC TGCACTTTGGGCACAACCGCAAGAAGCACCTGAACTATGTGGAATTCACTCAGTTCCTCCAGGAATTGCA ATTGGAACACGCAAGGCAAGCCTTTGCACTGAAAGACAAGAGCAAAAGCGGCATGATCTCGGGTCTGGAT TTCAGTGACGTCATGGTCACCATCCGGTCCCACATGCTCACTCCTTTTGTGGAGGAGAACCTGGTCTCAG CTGCCGGAGGGGGTACCTCACACCAAGTTAGCTTCTCCTACTTCAACGCATTTAACTCCTTACTCAACAA CATGGAGCTTGTTCGAAAGATCTATAGCACTTTAGCAGGCACGAGGAAAGATATTGAAGTCACCAAGGAG GAATTTGCCCAGAGCGCCATACGCTATGGACAGGTCACTCCACTAGAAATTGATATCTTGTACCAGCTTG CAGACCTATATAATGCCTCAGGGCGCTTGACTCTGGCAGACATCGAGAGAATAGCTCCGCTGGCCGAGGG GGCCTTACCTTACAACCTGGCAGAGCTTCAGAGGCAGCAATCTCCTGGCTTGGGCAGACCTATCTGGCTC CAGATTGCCGAGTCTGCATACAGGTTCACTCTGGGCTCAGTTGCTGGAGCTGTGGGGGCCACTGCGGTGT ACCCCATAGACCTGGTGAAGACCCGGATGCAAAACCAGCGTGGTACGGGCTCTGTGGTCGGGGAGCTGAT GTATAAAAACAGCTTCGACTGTTTTAAGAAAGTGTTGCGCTACGAGGGTTTCTTTGGACTGTACCGAGGT CTGATCCCACAGCTGATAGGGGTTGCACCAGAAAAAGCCATTAAGCTAACAGTTAATGATTTTGTCCGGG ACAAATTTACCAAAAGAGATGGCTCTATCCCACTGCCGGCGGAAATCCTTGCTGGAGGTTGCGCTGGAGG CTCGCAGGTCATCTTTACCAACCCTCTGGAGATAGTGAAGATCCGCCTGCAGGTAGCCGGAGAGATCACC ACAGGACCGAGAGTCAGTGCTCTGAATGTGCTTCAGGACCTGGGACTTTTCGGGCTGTACAAGGGTGCCA AAGCCTGTTTCCTCCGAGACATTCCCTTCTCCGCAATCTATTTTCCCGTGTACGCTCACTGCAAACTCCT CCTGGCTGATGAGAACGGACGCGTGGGAGGCATCAATCTCCTGACAGCGGGAGCCTTGGCAGGCGTACCT GCTGCTTCTCTGGTGACCCCTGCTGATGTCATCAAGACAAGACTGCAAGTGGCCGCCAGGGCCGGCCAGA CAACATACAGCGGGGTCGTCGACTGTTTCCGAAAGATTCTCCGGGAAGAAGGGCCCTCGGCATTTTGGAA AGGGACTGCAGCTCGGGTGTTTCGATCCTCACCTCAGTTTGGTGTCACTCTGGTTACCTACGAGCTTCTG CAGCGGTGGTTTTACATAGATTTTGGAGGCCTCAAACCTTCTGGCTCAGAACCAACGCCAAAGTCCCGCA TCGCAGACCTCCCTCCTGCCAACCCCGATCACATCGGTGGCTACAGACTTGCCACGGCCACTTTCGCTGG CATTGAAAACAAGTTTGGCCTTTACCTCCCCAAGTTTAAGTCTCCTAGCGTAGCTGTGGCTCAGCCCAAG GCGGCAGCAGCAGCCCAATGACATAGCAAGTACAGACCGAGGCCCAGGAGAACGGGCGGTACCGTGTCCA GTCAGCTGCATGGTACTGTCAGCGCTGGGGTCAACCACTTTCTATACGACCTATACATGTATTGTTTATA AAGTGATCATACGCCCAGGGAGAGCCGCAGTGCAGTTTCAAGCTTTAGTCTTTACGTGTTGAAATGTTTT CTGAGCCTTGGCATGAATTACGTGTTCTAGACTCTGCTTCGCACAGCTTGTACCTACAGTGACTGTACAT ATTGTACATCTTTGTACAGAGACACCTCGGCACCTCATCCCAACAAATCACGTTTATAAACATGAAACGC TGTTCTGAGTGGCTTGAACTGTACAGAAGGTTTTGAAAGTGTTTTATTATGAATCATGTAAGAATAAATG TACTAAAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AA
Notes:	The probe template was PCR amplified from IMAGE:6311836 using vector (pCMV-SPORT6.1) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6311836 which was retrieved directly from NCBI.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Strain:	C57BL/6
Age:	14.5 dpc
Theiler Stage:	TS23
Mutations:	none (wild-type)
Preparation:	section

Procedures

Fixation:	none
Embedding:	cryosection (OCT)
Staining procedure:	alkaline phosphatase + NBT/BCIP

General Information

Authors:	Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:	Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	screen
References:	[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:	EMAGE:17370 same embryo
	EMAGE:17369 same embryo
	EMAGE:17368 same embryo
	EMAGE:17371 same embryo
	EMAGE:17373 same embryo
	EurExpress:euxassay_003824 same experiment
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source