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EMAGE:17380

Cul5 cullin 5 ( MGI:1922967)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17380
euxassay_003813_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17380Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17380_wholemount_strong.wlz
17380_wholemount_moderate.wlz
17380_wholemount_weak.wlz
17380_wholemount_possible.wlz
17380_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17380_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7756
Entity Detected:Cul5, cullin 5 ( MGI:1922967)
Sequence:sense strand is shown

>T7756
CGTTGCCGGCGGCCCAAGCGGGTGCAAGCCCAGCGGCAGAAGCGAAGGCGAGCTGGGGAGGCCCGAGGAA
GTGGCTACTACCTCTTCCCGGTCTGGTCGGCTCCCGGTCCCTTCCCACCATTCGCCGCTCGCGTCTCCTC
AAGCGTTTGCATGCGCTCTCTCGCGTGGGCAGGCCGGGGTGACCATGTAGCTGGAAAGCCCGAGGAAGCA
CGGCTGCCCGGGACGAGCTCGGCGCTGACGGCACGCCGCTCCGGCGTCCCCCGCATCCCCCGCCGCGGCC
TGCGGGGTCCTGCTGGGAACCCCGGCCTCTCGAGGAGGCCTGGCCCCGAGCGCCGCCAAGTCTCGCCCCG
TCTCGCGAGAGTCCAAGTTGAGAACATGGCGACGTCTAATCTGTTAAAGAATAAAGGTTCTCTCCAGTTT
GAAGACAAGTGGGACTTCATGCATCCAATTGTTTTGAAGCTTTTACGCCAGGAATCTGTAACAAAACAGC
AGTGGTTTGATCTATTTTCGGATGTACATGCTGTCTGTCTCTGGGATGATAAAGGCTCATCAAAAATTCA
TCAGGCTTTAAAAGAAGATATTCTTGAGTTTATTAAGCAAGCACAGGCTCGTGTACTGAGCCATCAAGAT
GACACAGCTTTGCTGAAGGCATATATTGTTGAATGGCGGAAATTCTTCACACAGTGTGATATTTTACCAA
AACCTTTTTGTCAATTAGAGGTGACTCTATTGGGTAAACAAAGCAGCAATAAAAAATCAAATATGGAAGA
CAGTATTGTTCGAAAGCTCATGCTTGATACGTGGAATGAGTCGATTTTTTCAAATATAAAGAACAGACTC
CAGGACAGTGCAATGAAGCTGGTGCATGCTGAGAGATTAGGGGAAGCTTTTGATTCCCAGCTGGTCATCG
GGGTGCGAGAGTCCTATGTTAATCTTTGCTCCAACCCCGAGGACAAGCTTCAGATCTATAGGGATAATTT
TGAGAAGGCATACTTGGACTCAACAGAGAGGTTTTATAGAACACAGGCACCCTCATATTTACAGCAAAAT
GGTGTGCAGAATTACATGAAATATGCAGATGCTAAATTAAAAGAAGAAGAAAAAAGAGCACTCCGATACT
TAGAAACACGACGAGAGTGTAACTCTGTGGAAGCACTCATGGAATGCTGTGTAAATGCGCTGGTGACCTC
CTTTAAAGAGACTATTTTAGCAGAATGCCAAGGCATGATCAAGCGAAATGAAACTGAAAAGTTACATTTG
ATGTTTTCCTTGATGGACAAAGTTCCTAATGGGATAGAGCCGATGTTGAAGGACTTGGAGGAGCATATTA
TAAGTGCGGGCCTAGCAGACATGGTGGCCGCAGCTGAAACCATCACTACTGACTCTGAGAAGTATGTGGA
GCAATTACTTACACTGTTTAATAGATTCAGTAAACTGGTCAAAGAAGCTTTTCAGGATGATCCTCGTTTC
CTTACTGCAAGAGATAAGGCATATAAAGCAGTTGTTAATGATGCTACTATATTTAAACTTGAATTGCCTT
TGAAGCAAAAAGGAGTGGGGTTGAAAACTCAGCCTGAGTCAAAATGCCCCGAGTTGCTTGCCAATTACTG
TGACATGTTGTTAAGGAAAACGCCATTAAGCAAAAAACTAACATCTGAGGAGATTGAAGCAAAGCTTAAA
GAAGTGCTCTTGGTACTTAAATATGTACAAAACAAAGATGTTTTTATGAGGTATCACAAAGCTCATCTTA
CCCGACGTCTCATATTGGACATCTCTGCTGATAGTGAGATTGAAGAAAACATGGTAGAGTGGCTAAGAGA
AGTTGGTATGCCAGCAGATTATGTGAACAAGCTTGCTAGAATGTTTCAGGACATAAAAGTATCTGAAGAC
TTGAACCAAGCTTTTAAGGAAATGCACAAAAATAATAAGTTGGCATTACCAGCTGATTCCGTTAATATAA
AGATTTTGAATGCTGGTGCTTGGTCTAGAAGCTCCGAGAAAGTCTTTGTCTCACTTCCTACTGAACTGGA
GGATTTGATACCTGAAGTAGAAGAATTTTACAAAAAAAATCACAGTGGTAGAAAATTACACTGGCACCAT
CTCATGTCAAATGGAATTATAACATTTAAAAATGAAGTAGGTCAGTATGATTTGGAAGTAACCACGTTTC
AGTTGGCTGTGTTGTTTGCATGGAACCAAAGGCCTAGAGAGAAAATCAGCTTTGAAAATCTAAAACTTGC
AACGGAACTCCCAGATGCTGAACTTAGAAGGACTTTATGGTCTTTAGTAGCTTTTCCCAAGCTCAAACGG
CAAGTTTTGTTGTATGACCCTCAAGTCAACTCACCCAAAGATTTTACAGAAGGCACCCTCTTCTCAGTGA
ACCAGGACTTCAGTCTCATAAAAAATGCAAAAGTACAGAAAAGGGGGAAAATCAATTTGATTGGACGCTT
GCAGCTCACTACAGAACGAATGAGAGAAGAAGAAAATGAAGGGATAGTCCAACTAAGAATATTAAGAACC
CAGGAAGCCATCATACAAATAATGAAAATGAGAAAGAAAATTAGCAATGCCCAGCTGCAGACTGAATTAG
TAGAAATTCTGAAAAACATGTTCCTGCCTCAGAAGAAGATGATAAAGGAGCAGATGGAGTGGCTGATTGA
ACACAGGTACATCCGGAGGGACGAGGCCGACATCAACACCTTCATCTACATGGCCTAGCCGGGCCGCTGC
TGCCGCACACACGCCCCTGAAGGCCTGGGCAGAGGCTGTCCCAGCCCCAGCTGGAGGAAGCTTTATTTGG
ACTTTGATTACATAAATATTAAACTCTGCCTTACCTTACAAAACGACTCTATTTTGCCAGTCACATTAGT
TAGCATGATGGCATTCCCTTCATGTTGCACACTCTTTAACAGCATGCTGTTTTGTGGAGAAAATTGCATT
CATGAAGAGCCCATTGTGAACTTTCAAAGTCAATTCAATTTTTACCCACCTAGAGAAATAACATGTCGGA
AGGGTGAGGGTGGGGTTCTTTTTGCTTCTTTTATCCCCTTTTCTTCTTCAAAGAAATATACTTGCACAAG
GAAGGATTTTCAGATATTCATGCACTGAAAAATGCTGGGGATTTTTGTTTGTTTGTTTGGGTTTTTTTAA
ATTCTTTTTTTTTTTTTTTTTTTTATGAAATTAAAGCTAGACGTAGCACTAAGCTACTTCTGATGCAAAG
AATGAATCGTCAACACTGTGCTGGGCAAGGGCAGGCACACTTGAGAAGACACGTGTGCCAGTGTCAAGTT
GTTTGTCAAACACTGCTTTCACTTTAGTGACTGGATCTTAATGGTAACCTGAAATGGTATTAAATATTTC
TACCTTATAAATCCTGATTTTCAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6312416 using vector (pCMV-SPORT6.1) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6312416 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17383 same embryo
 EMAGE:17382 same embryo
 EMAGE:17381 same embryo
 EMAGE:17378 same embryo
 EMAGE:17379 same embryo
 EurExpress:euxassay_003813 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS