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EMAGE:17475

Tssk6 testis-specific serine kinase 6 ( MGI:2148775)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17475 EMAGE:17475 EMAGE:17475 EMAGE:17475 EMAGE:17475
"Pseudo-wholemount" of euxassay_003946. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_003946_01 euxassay_003946_02 euxassay_003946_03 euxassay_003946_04
EMAGE:17475 EMAGE:17475 EMAGE:17475 EMAGE:17475 EMAGE:17475
euxassay_003946_05 euxassay_003946_06 euxassay_003946_07 euxassay_003946_08 euxassay_003946_09
EMAGE:17475 EMAGE:17475 EMAGE:17475 EMAGE:17475 EMAGE:17475
euxassay_003946_10 euxassay_003946_11 euxassay_003946_12 euxassay_003946_13 euxassay_003946_14
EMAGE:17475 EMAGE:17475 EMAGE:17475 EMAGE:17475 EMAGE:17475
euxassay_003946_15 euxassay_003946_16 euxassay_003946_17 euxassay_003946_18 euxassay_003946_19
EMAGE:17475 EMAGE:17475 EMAGE:17475
euxassay_003946_20 euxassay_003946_21 euxassay_003946_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17475Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17475_wholemount_strong.wlz
17475_wholemount_moderate.wlz
17475_wholemount_weak.wlz
17475_wholemount_possible.wlz
17475_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17475_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T9726
Entity Detected:Tssk6, testis-specific serine kinase 6 ( MGI:2148775)
Sequence:sense strand is shown

>T9726
GGGAGTGGGCACATGGGGGCACGGGGGTGCAGGTGCCAAGCACCATGGGTTAGGCCCGAGATTGGAGTCC
GGCCGCCCCCCGACAGCAGCCGCCTCCTGCTCCCCGCGCGCCCCGGGCGCCACCATGTCGGGCGACAAAC
TCCTGAGCGAACTTGGCTATAAGCTGGGCCGCACGATAGGTGAGGGCAGCTACTCCAAGGTGAAAGTGGC
CACCTCCAAGAAGTATAAAGGGACGGTGGCCATCAAGGTGGTGGACCGCCGGCGAGCGCCTCCGGACTTC
GTCAACAAGTTCCTGCCTCGAGAGCTGTCCATCCTGCGGGGAGTACGGCACCCGCACATCGTACACGTTT
TCGAGTTCATCGAAGTGTGCAATGGGAAGCTGTACATCGTGATGGAGGCAGCAGCCACCGACCTGCTGCA
GGCAGTGCAGCGCAACGGGCGCATCCCGGGGTCGCAGGCGCGCGAACTCTTCTCGCAGATCGCGGGCGCC
GTGCGCTACCTGCACGACCACCACCTGGTGCACCGCGACCTCAAGTGCGAAAACGTGCTGCTAAGCCCTG
ACGAGCGCCGCGTCAAGATCACGGATTTCGGTTTCGGCCGCCAGGCGCACGGCTACCCAGACCTGAGCAC
CACCTACTGCGGCTCGGCCGCGTATGCGTCACCTGAGGTGCTCCTGGGCATCCCCTACGACCCTAAGAAA
TACGACGTGTGGAGCCTGGGCGTTGTGCTCTACGTCATGGTCACCGGGTGCATGCCCTTCGACGACTCGG
ACATTGCTGGCCTACCCCGGCGCCAGAAGCGCGGCGTGCTCTACCCTGACGGCCTCGAACTGTCGGAACG
ATGCAAATCCTTGATCGCCGAGCTGCTACAGTTCAGCCCGTCTGCCCGGCCCTCGGCGGGCCAGGTGGCG
CGCAATGGCTGGCTGCGGGCCGGGGACTCCGGCTGGGAGCCGGGGTTCTCGCTGTTCCCGCCGCACCAGG
CACAGAGCCAGGGCGGCGCACGCGCGAAGGGCGAGCTTCGGGAAACCCGCGAAGTCGCCGCGCGCCACTG
CGCACGCGTCCTGTCCCTTCCCCTTCCCCCACGGCGGCGGCCCTCTGAGGCCTGCTGTTGGGTTCTGATT
CCTCCTGCACAAACTGATTGCTGGAGAGCGCATGCGCATCCTCGATTTCTGGCGAGAAGGCCCCGGGAGG
GGCGCAAAGAGAAGAGAGAGAAGCATTGCGCCTGCGCAGAATGAGCTGTTGCACGGTGGGTTGCCATGCT
ACAGAGAAACCGTGGGCCAGCCGTGCACGCTAAGTTCCAGGTTGGAACCTGCAATAAATTCGCTCTTCCT
TCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:6708013 using vector (pDNR-LIB) specific primers. Forward Primer - name:M13 forward (-21), sequence:TGTAAAACGACGGCCAGT; Reverse Primer - name:T3-pDNR-LIB rv, sequence:CAAATTAACCCTCACTAAAGGGTGTTCACTTACCTACTGGGC. Anti-sense probe was then transcribed from the PCR amplified template using T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6708013 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17477 same embryo
 EMAGE:17476 same embryo
 EMAGE:17479 same embryo
 EMAGE:17478 same embryo
 EMAGE:17474 same embryo
 EurExpress:euxassay_003946 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS