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EMAGE:17587

Dio1 deiodinase, iodothyronine, type I ( MGI:94896)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17587
euxassay_005911_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17587Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17587_wholemount_strong.wlz
17587_wholemount_moderate.wlz
17587_wholemount_weak.wlz
17587_wholemount_possible.wlz
17587_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17587_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T10039
Entity Detected:Dio1, deiodinase, iodothyronine, type I ( MGI:94896)
Sequence:sense strand is shown

>T10039
AGAGCCACTTCTGCCCCGTGCTGAGATGGGGCTGCCCCAGCTATGGCTGTGGCTGAAGCGGCTTGTGATA
TTCCTGCAGGTGGCCTTGGAGGTGGCTGTAGGCAAGGTGCTAATGACGCTGTTCCCAGGGAGAGTCAAAC
AGAGCATCCTGGCCATGGGCCAGAAGACCGGGATGGCCAGGAACCCCCGATTCGCCCCTGACAACTGGGT
CCCCACCTTCTTCAGCATCCAGTACTTCTGGTTTGTCCTGAAGGTCCGCTGGCAGAGACTGGAAGACAGG
GCTGAGTTTGGGGGGCTGGCCCCCAACTGCACCGTGGTCTGCCTCTCAGGACAGAAGTGCAACATCTGGG
ATTTCATTCAAGGCAGCAGGCCCCTGGTGTTGAACTTTGGCAGTTGCACCTGACCTTCATTTCTTCTCAA
ATTTGACCAGTTCAAGAGACTCGTAGATGACTTTGCCTCCACAGCCGATTTCCTCATCATTTACATTGAA
GAAGCTCACGCCACAGATGGCTGGGCTTTTAAGAACAACGTGGACATCCGGCAGCACCGGAGCCTCCAGG
AGCGCGTGCGGGCAGCCCGCATGCTGCTGGCCAGGAGCCCCCAGTGCCCTGTGGTGGTGGACACAATGCA
GAACCAGAGCAGCCAGCTCTACGCGGCCCTGCCTGAGAGGCTCTACGTGATACAGGAGGGCAGGATCTGC
TACAAGGGTAAAGCTGGCCCTTGGAACTACAATCCTGAGGAAGTCCGAGCTGTCCTGGAAAAGCTTTGCA
CTCCACCTAGACACGTGCCTCAGCTCTAGGGGACCAGCAGGAAGGCTCCCCAAGCTTGGTACTTTCCCAC
ACCAGTACAGATGTCTTTTACCTTTGACCTGTGTTCCCAGATGAAGTACTAGCTCAGATTTTTCTGATCT
AAACAAATAACTACCAGGGAGGCAATGCAGCTCACAGCACAAACTGTGACAACCAGAAATAAAGCAATGC
TGAGCTGTTAGCAAAAGTAAGTTACAGCTCCACACTGCTCCCACAGCAGAGACCAATCCAGAGTGTCCAC
CTTCTGGTGGGAGGGCACTCACTCACATGCTTGGATGACAGACTTCTGAAGTGTCGTGACTCCTGAAGAT
GACGTCAAAAGCTCAATCCATGTGTCCAATTTTGCCACTTATAGACCCAATCGTATAAAATGCTGAACTG
GTTTGTTTAGCACAAGCAAGAGGCAGGCATGTTCTGCTTGTAGGAACCATAGGCATTGGAAACACTTTTC
TGGCCGAAAGATTGAAATCTGTTGAGATTGTTGGTGATAGGTGTTTCCATGGCAACATAGAATCTCATTC
TACTCCCTCTACCATCTTGAAATAGATTGCACAGGAATCTGGCTCTCTGGCACTGATGCCAAAGCTTTAT
AACTTTAACTAAACCAAATCGCAGGCGCCAGCAAAAGCTGCCATGTAGGCCCTGTTGTGACTCTGTCCTC
CTGGGTCACAGTCTCTTACTGGTCTTTTGTGTTCGATAGCATTGGACTGATAGGTAGCCATGGCTTCATC
TGTCATGTCTGCTTCTTTTTATATTTGTGTATGATGGTCACAGTGTAAAGTTCCCACAGCTGTGACTTGA
TTTTTAAAAATGTCGGAAGATGCAGCAAGCTAACAATTAAAATCTGTCAGGCTAAAAAAAAAAAAAAAAA
AA
Notes:The probe template was PCR amplified from IMAGE:6766076 using vector (pDONR 201) specific primers. Forward Primer - name:T7-pDONR 201-fw, sequence:CGTAATACGACTCACTATAGGGCTCGCGTTAACGCTAGCATGGAT; Reverse Primer - name:T3-pDONR 201-rv, sequence:CAAATTAACCCTCACTAAAGGGGTGCAATGTAACATCAGAGA. Anti-sense probe was then transcribed from the PCR amplified template using T3 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6766076 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17584 same embryo
 EMAGE:17586 same embryo
 EMAGE:17583 same embryo
 EMAGE:17585 same embryo
 EMAGE:17588 same embryo
 EurExpress:euxassay_005911 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS