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EMAGE:17717

Mpnd MPN domain containing ( MGI:1915297)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:17717 EMAGE:17717 EMAGE:17717 EMAGE:17717 EMAGE:17717
"Pseudo-wholemount" of euxassay_006067. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_006067_01 euxassay_006067_02 euxassay_006067_03 euxassay_006067_04
EMAGE:17717 EMAGE:17717 EMAGE:17717 EMAGE:17717 EMAGE:17717
euxassay_006067_05 euxassay_006067_06 euxassay_006067_07 euxassay_006067_08 euxassay_006067_09
EMAGE:17717 EMAGE:17717 EMAGE:17717 EMAGE:17717 EMAGE:17717
euxassay_006067_10 euxassay_006067_11 euxassay_006067_12 euxassay_006067_13 euxassay_006067_14
EMAGE:17717 EMAGE:17717 EMAGE:17717 EMAGE:17717 EMAGE:17717
euxassay_006067_15 euxassay_006067_16 euxassay_006067_17 euxassay_006067_18 euxassay_006067_19
EMAGE:17717 EMAGE:17717 EMAGE:17717 EMAGE:17717 EMAGE:17717
euxassay_006067_20 euxassay_006067_21 euxassay_006067_22 euxassay_006067_23 euxassay_006067_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:17717Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
17717_wholemount_strong.wlz
17717_wholemount_moderate.wlz
17717_wholemount_weak.wlz
17717_wholemount_possible.wlz
17717_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:17717_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4195
Entity Detected:Mpnd, MPN domain containing ( MGI:1915297)
Sequence:sense strand is shown

>T4195
GGCAGCTCCCGAGTCTCTGTCTCCCGGGGCCACGGCCGAGGAGGCGCCGGAGGAGGATGAGGACGACGCG
GAGGCCGAGGACCCCGAGCGCGGGACGGGTAGCGGAGGGCGCAGCGGCAGCCTCGGTGGCAGCGGAGGCG
GCACGGCAGGGCCTGGGATGGCCCTAGGGGGCGCGCTCACGAGGCGCGCGGTCACGCTTCGGGTGCTGCT
CAAAGACGAGCTGCTGGAGCCCGGTGAGGGGGTGCTATCCATCTACTACCTGGGCAGGAAGTTTACTGGG
GACCTGCAGCTGGATGGCAGGATCGTGTGGCAGGAAACTGGACAAGTCTTCAACTCACCCAGCGCCTGGG
CCACACACTGCAAGAAGCTCGTCAACCCAGCCAAGAAATCTGGCTGTGGCTGGGCCTCTGTCAAGTACAA
GGGCCAGAAGCTGGACAAATACAAGGCCGCCTGGCTTCGCCGGCACCAGCTACATATGCCTGTAGCTACG
GCCGATGAGAGTCCCACCAGTGAAGGGGAGGAGGAAGAACTGCTGTTGGAGGAGGAGGAAGAAGATGTGC
TGGCTGGGGTCTCATCAGAGGACAAAGGCCACAGACCCCCTGGGAAGGGTTCCTTGGAGCCAGAGGCCAC
ACCCCCAGGGAAGCGTATGGACAAGGTGCCAGTGCCCATCCGTTACTGCATGCTGGGCAGCCGAGACTCC
GCCAGGAACCCCCACACTCTGGTAGAAGTAACATCCTTTGCTGCCATCAACAAGTTCCAGCCATTCAACG
TGGCCGTTTCCAGTAATGTGCTGTTCCTCTTGGACTTCCACTGTCACCTGACTCGGAGTGAGGTCGTGGG
CTACCTTGGTGGTCGCTGGGACATCAACAATCAGATGCTGACCGTGCTGAGAGCCTTCCCCTGCAGGAGT
CGGCTGGGGGACACTGATACTGCAGCCACGGTTGAGGAGGAGATCTACCAGGTCCTGTTCCTTCGAGGCC
TGTCCCTGGTGGGCTGGTACCACAGCCACCCACACAGCCCTGCAGTACCCTCCTTGCAGGACATTGACGC
ACAGATGGAGTACCAGTTGAGACTGCAAGGCTCCAGCAATGGCTTCCAGCCCTGCCTGGCCCTGCTGTGC
TCCCCCTACTACTCTGGCAACCCAGGCCCTGAGTCCAAGATCTGCCCTTTCTGGGTGATGCCTCCCCCTG
AGCAAAGGCCCAGTGACTATGGAATCCCCATGGACGTAGAGATGGCGTATGTCCAAGATAGCTTCTTGAC
CAACGATGTTCTTCAGGAGATGGTGATGCTGGCTGAGTTCTACAAGGGTGCCCCTGACCTGGTGAAGTTC
CAAGAGGCCTGGAGCCCAGAGCATACCTACCTGGACAAACTCAAGATGTCCTTGGCCAGCAGGACCCCGA
AGGACCAGGGCATGTGCCACGTGCTGGAGCAGGTCTGCAGTGTGCTCAAGCAGGGGAGCTGAGGCTGCAT
AGGCTTTGCTGTCCTGGGACAGGCTGGGTAATAAAGTCTCTGAGTGCCCACAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4488477 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4488477 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:17714 same embryo
 EMAGE:17713 same embryo
 EMAGE:17716 same embryo
 EMAGE:17715 same embryo
 EMAGE:17712 same embryo
 EurExpress:euxassay_006067 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS