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EMAGE:19244

Stk16 serine/threonine kinase 16 ( MGI:1313271)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19244 EMAGE:19244 EMAGE:19244 EMAGE:19244 EMAGE:19244
"Pseudo-wholemount" of euxassay_004901. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_004901_01 euxassay_004901_02 euxassay_004901_03 euxassay_004901_04
EMAGE:19244 EMAGE:19244 EMAGE:19244 EMAGE:19244 EMAGE:19244
euxassay_004901_05 euxassay_004901_06 euxassay_004901_07 euxassay_004901_08 euxassay_004901_09
EMAGE:19244 EMAGE:19244 EMAGE:19244 EMAGE:19244 EMAGE:19244
euxassay_004901_10 euxassay_004901_11 euxassay_004901_12 euxassay_004901_13 euxassay_004901_14
EMAGE:19244 EMAGE:19244 EMAGE:19244 EMAGE:19244 EMAGE:19244
euxassay_004901_15 euxassay_004901_16 euxassay_004901_17 euxassay_004901_18 euxassay_004901_19
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euxassay_004901_20 euxassay_004901_21 euxassay_004901_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19244Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19244_wholemount_strong.wlz
19244_wholemount_moderate.wlz
19244_wholemount_weak.wlz
19244_wholemount_possible.wlz
19244_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19244_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T2479
Entity Detected:Stk16, serine/threonine kinase 16 ( MGI:1313271)
Sequence:sense strand is shown

>T2479
TCGAGCCAGATTCGGCACGAGGGTTACCATTCTGATGTTGTAGTGGCAGACCCTGTGCTCGTTCCCGAGC
GACGGAGGGTGGACTCGGCCAGAGGTGGGCTCGAGCCCCGCACCTCCTGCGCCGCCACCCCATGCCTGAC
GGGTGCGAGAGCTGGACCTGGCCGAAGGTGGGCCGGGGTTGAAAGAAGCGGCCTGCATGACCCGCCGGGA
CCCCACCGCATCGCCTGGAAGAGCCCACTCTCCCTGGAAGGAAGACCATCCCTGAAGAGGATGACTGAGA
CGTTATGGGCCACGCACTGTGTGTCTGCTCCCGGGGAACTGTCATCATTGACAATAAGCGTTACCTCTTC
GTCCAGAAATTGGGGGAAGGTGGATTCAGCTATGTGGACCTAGTGGAGGGCTTGCATGATGGACACTTCT
ACGCCCTGAAGCGGATCCTGTGCCATGAGCAGCAAGACCAGGAAGAAGCCCAACGAGAGGCAGAGATGCA
TCGCCTCTTCCAGCATCCCAACATCCTTCGCCTCATGGCTTACTCTCTGAAAGAACGAG
Notes:The probe template was PCR amplified from IMAGE:1248454 using vector specific primers. Forward Primer - name:RZPD M13 forward, sequence:GCTATTACGCCAGCTGGCGAAAGGGGGATGTG; Reverse Primer - name:RZPD M13 reverse, sequence:CCCCAGGCTTTACACTTTATGCTTCCGGCTCG. Anti-sense probe was then transcribed from the PCR amplified template using T3 polymerase. EMAGE Editor's Note: the partial probe sequence indicated here was given by the EURExpress Consortium and has been checked using BLAST comparison against all available partial insert sequences of IMAGE:1248454 from NCBI. In cases where no BLAST hit was found (because the two sequence reads are found at opposing ends of the insert sequence), both end sequences were then checked against the appropriate cDNA RefSeq to ensure validity of the information.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19245 same embryo
 EurExpress:euxassay_004901 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS