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EMAGE:19367

Cyp4f13 cytochrome P450, family 4, subfamily f, polypeptide 13 ( MGI:2158641)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19367 EMAGE:19367 EMAGE:19367 EMAGE:19367 EMAGE:19367
"Pseudo-wholemount" of euxassay_002159. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_002159_01 euxassay_002159_02 euxassay_002159_03 euxassay_002159_04
EMAGE:19367 EMAGE:19367 EMAGE:19367 EMAGE:19367 EMAGE:19367
euxassay_002159_05 euxassay_002159_06 euxassay_002159_07 euxassay_002159_08 euxassay_002159_09
EMAGE:19367 EMAGE:19367 EMAGE:19367 EMAGE:19367 EMAGE:19367
euxassay_002159_10 euxassay_002159_11 euxassay_002159_12 euxassay_002159_13 euxassay_002159_14
EMAGE:19367 EMAGE:19367 EMAGE:19367 EMAGE:19367 EMAGE:19367
euxassay_002159_15 euxassay_002159_16 euxassay_002159_17 euxassay_002159_18 euxassay_002159_19
EMAGE:19367 EMAGE:19367 EMAGE:19367 EMAGE:19367
euxassay_002159_20 euxassay_002159_21 euxassay_002159_22 euxassay_002159_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19367Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19367_wholemount_strong.wlz
19367_wholemount_moderate.wlz
19367_wholemount_weak.wlz
19367_wholemount_possible.wlz
19367_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19367_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6023
Entity Detected:Cyp4f13, cytochrome P450, family 4, subfamily f, polypeptide 13 ( MGI:2158641)
Sequence:sense strand is shown

>T6023
GGAAGTTGTGGAAGATTCGCTGCTCGTGAGAGAAGGTGCCGGGGTGGAAGGCAACAAGGATGCTACAGCT
ATGTCTGTCCTGGCTGGGAATGGGGTCCCTGACTGCCTCTCCGTGGCATCTACTGCTGCTGGGAGGGGCA
TCTTGGATTCTAGCCCGAATTCTGGCCTGGATCTATGCCTTCTATGACAACTGCAGTCGCCTTCGTTGCT
TCCCTCAGCCCCCTAAACCGAGCTGGTTCTGGGGTCACTTGGCCTTGATGAAGAACAACGAGGAAAGCAT
GCAGTTCATAACACATCTGGGCCATGACTTCCGTGATGTCCACCTCTCTTGGGTTGGACCTGTGTACCCA
ATCCTGCGACTCGTCCACCCGAACTTCATTGCTCCCCTGCTCCAAGCCTCAGCTGCTGTTGCACCCAAGG
AAATGACTCTCTATGGCTTCCTGAAGCCCTGGCTGGGGGATGGGCTCCTGATGAGTGCTGGTGACAAGTG
GAGCCACCACCGACGCCTGCTGACACCTGCCTTTCACTTTGACATCCTGAAGTCCTATGTGAAGATTTTT
AACAAGAGTGTGAACATCATGCATGCTAAGTGGCAGTGCCTGGCCTCCAAGGGCACTTCCCGTCTGGACA
TGTTTGAACACATCAGCCTCATGACCTTGGACAGCCTGCAGAAGTGCATCTTCAGTGTCGACAGCAACTG
CCAAGAGTCTGACAGCAAATACATTGCTGCAATCCTGGAACTTAGCTCCCTTGTAGTGAAACGGCACCGC
CAGCCCTTCCTGTACCTGGACCTCCTGTACTATCTCACTGCTGATGGGCGTCGCTTCCGCAAAGCCTGCG
ACCTGGTGCACAACTTCACAGATGCTGTCATCAGGGAGAGACGCAGCACCCTCAATACGCAGGGTGTTGA
ATTCCTAAAGGCCAAGGCTAAGACCAAAACTTTAGACTTTATTGATGTTCTCTTGATGGCTGAGGATGAA
CATGGTAAGGGACTATCGAATGAGGACATCCGAGCAGAGGCTGACACCTTCATGTTTGGAGGCCATGACA
CCACCACCAGTGCACTCTCCTGGATTCTCTACAACCTGGCGAGGCACCCAGAATACCAGGAGCGCTGCCG
GCAGGAGGTTCAGGAGCTGCTGAGGGACCGAGACTCCGAGGAGATTGAATGGGACGACCTGGCCCAGCTA
CCCTTCCTGACCATGTGCATCAAGGAGAGTCTGCGGCTGCATCCCCCAGTCTTATTAATCTCCCGATGCT
GCACCCAGGACATTCTGCTGCCAGATGGCCGGGCCATCCCCAAAGGGAACATCTGTGTCATCAGCATTTT
CGGGGTTCACCACAACCCTTCAGTCTGGCCAGACCCTGAGGTCTACAACCCCTTCAGATTTGACCCAGAA
AACCCACAGAAAAGGCCACCTCTGGCTTTTATTCCCTTCTCAGCGGGGACCAGGAACTGCATAGGACAGA
CTTTCGCCATGAGCGAGATAAAGGTGGCGCTGGCGCTGACCCTGCTGCGCTTCCGCATCCTGCCAGACGA
CAAGGAGCCGCGCCGGAAGCCAGAGCTGATCCTGCGCGCGGAGGGCGGGCTGTGGCTGCGGGTGGAGCCG
CTGAGCGCCGGCGCACAGTGACCTTACAGCTGCCTTGGGACCAGCTCACCCATGCTCCTACCTCTTTAAA
TCTCTGAATAAACAGAACTGCCTCCTGAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3487830 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3487830 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19368 same embryo
 EMAGE:19370 same embryo
 EMAGE:19366 same embryo
 EMAGE:19365 same embryo
 EMAGE:19369 same embryo
 EurExpress:euxassay_002159 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS