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EMAGE:19368

Emg1 EMG1 nucleolar protein homolog (S. cerevisiae) ( MGI:1315195)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19368 EMAGE:19368 EMAGE:19368 EMAGE:19368 EMAGE:19368
"Pseudo-wholemount" of euxassay_002163. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_002163_01 euxassay_002163_02 euxassay_002163_03 euxassay_002163_04
EMAGE:19368 EMAGE:19368 EMAGE:19368 EMAGE:19368 EMAGE:19368
euxassay_002163_05 euxassay_002163_06 euxassay_002163_07 euxassay_002163_08 euxassay_002163_09
EMAGE:19368 EMAGE:19368 EMAGE:19368 EMAGE:19368 EMAGE:19368
euxassay_002163_10 euxassay_002163_11 euxassay_002163_12 euxassay_002163_13 euxassay_002163_14
EMAGE:19368 EMAGE:19368 EMAGE:19368 EMAGE:19368 EMAGE:19368
euxassay_002163_15 euxassay_002163_16 euxassay_002163_17 euxassay_002163_18 euxassay_002163_19
EMAGE:19368 EMAGE:19368 EMAGE:19368
euxassay_002163_20 euxassay_002163_21 euxassay_002163_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19368Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19368_wholemount_strong.wlz
19368_wholemount_moderate.wlz
19368_wholemount_weak.wlz
19368_wholemount_possible.wlz
19368_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19368_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T6015
Entity Detected:Emg1, EMG1 nucleolar protein homolog (S. cerevisiae) ( MGI:1315195)
Sequence:sense strand is shown

>T6015
CGGACGTGAAGTTCTAACTTAAGGACTTCGGTGCAACTTCCGGTCTGCCTACAAGATGTCTGCGGCCAGT
GGTGGCTTCCAACCTCGTGAGCGGCGATTTTCAGTGCAGGAGCAGGACTGGGAGACTACGCCGCCTAAGA
AGCTCCGGCTTGGGGCAGGAAGCAAGTGCGGAGGCCGGAGGCTCATTGTGGTGCTGGAAGGGGCCAGTCT
GGAGACAGTCAAGGTAGGGAAAACTTACGAGCTACTCAACTGTGACAGGCACAAGTCCATGTTGTTGAAG
AATGGACGGGACCCAGGGGAAGTCAGACCAGACATCACCCACCAGAGCCTGCTGATGCTTATGGACAGCC
CCCTGAACCGAGCTGGCTTGCTACAGGTTTACATCCACACACAGAAGAACGTGCTGATTGAAGTGAACCC
CCAGACTCGAATTCCTAGAACCTTTGACCGATTTTGTGGCCTCATGGTTCAGCTTTTACACAAACTGAGC
GTCCGAGCAGCCGACGGCCCTCAGAAGCTATTGAAGGTAATTAAGAATCCAGTGTCCGACCACTTCCCAG
TTGGCTGTATGAAAATTGGCACTTCCTTTTCTGTTGAAGACATCAGTGACATTCGAGAGTTGGTGCCCAG
TAGTGACCCAGTTGTGTTTGTGGTGGGGGCCTTTGCCCATGGCAAGGTCAGTGTGGAGTACACAGAAAAG
ATGGTGTCCATCAGCAACTATCCACTCTCTGCTGCGCTTACCTGTGCTAAAGTCACCACAGCTTTTGAAG
AAGTATGGGGTGTCATTTGAGCCCAGCAGGGCCTGGTTCTCAGACAGGAAGGACTCTTGGCAGTTTGTCT
TTTGGCTCCTAAGATCTGCTGGAAGATAATCTTCTGTACCAAGACTGCAGAGTGGGGAGACAACACTGTA
TAGTTGTTTTTTGTTTTTCCTATAAAGAGTTTTATTTCGTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:3487480 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZPD T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:3487480 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19367 same embryo
 EMAGE:19370 same embryo
 EMAGE:19366 same embryo
 EMAGE:19365 same embryo
 EMAGE:19369 same embryo
 EurExpress:euxassay_002163 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS