Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:19753

Ccdc75 coiled-coil domain containing 75 ( MGI:1858435)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:19753 EMAGE:19753 EMAGE:19753 EMAGE:19753 EMAGE:19753
"Pseudo-wholemount" of euxassay_006241. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_006241_01 euxassay_006241_02 euxassay_006241_03 euxassay_006241_04
EMAGE:19753 EMAGE:19753 EMAGE:19753 EMAGE:19753 EMAGE:19753
euxassay_006241_05 euxassay_006241_06 euxassay_006241_07 euxassay_006241_08 euxassay_006241_09
EMAGE:19753 EMAGE:19753 EMAGE:19753 EMAGE:19753 EMAGE:19753
euxassay_006241_10 euxassay_006241_11 euxassay_006241_12 euxassay_006241_13 euxassay_006241_14
EMAGE:19753 EMAGE:19753 EMAGE:19753 EMAGE:19753 EMAGE:19753
euxassay_006241_15 euxassay_006241_16 euxassay_006241_17 euxassay_006241_18 euxassay_006241_19
EMAGE:19753 EMAGE:19753 EMAGE:19753 EMAGE:19753
euxassay_006241_20 euxassay_006241_21 euxassay_006241_22 euxassay_006241_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:19753Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
19753_wholemount_strong.wlz
19753_wholemount_moderate.wlz
19753_wholemount_weak.wlz
19753_wholemount_possible.wlz
19753_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:19753_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T733
Entity Detected:Ccdc75, coiled-coil domain containing 75 ( MGI:1858435)
Sequence:sense strand is shown

>T733
TCCTCGAGCCTGTTGGCCTACTGGAAAGGTTCCGGGCAGTAAAGCTCCGGCTTCAGGGTGTGCGGGCGCT
CAGGAGAATGACAGAGGTCGGTGCAAGTTGGCTGTGACTGCCTATCACAGCGTCAGCTACGCCCCATCCG
AACAAGATCACCAAGACTTGTATTCTTTGTGGTTGTGAACCAATTATTTAGCCACATTGAGCCTCAGTTT
TCCCTGCTGGAAAGTGGAACTAATACTTCTTATCTACTGGGCTGCTCCTAAGCTAGGTAGTGTTGTCAGA
TGAAGGAGAGCATGACAGAAGAGGAGGACTATATGTCGGATTCCTTCATTAATGTTCAAGAAGATGTCAG
ACCCGGTGTGCCGATGCTGAGGCAGATCCGAGAAGCCCGTCGGAAAGAAGAAAAGCAACAGCAAGCTAAT
CTGAGAAACAGGCAGAAGAGCGTAAAAGAAGAAGAGCGGGAAAGACGTGACATCGGGTTGAAGAATGCAC
TCGGCTGTGAAAACAAAGGGTTCGCTCTGCTCCAAAAGATGGGATACAAGAGTGGGCAGG
Notes:The probe template was PCR amplified from IMAGE:1890617 using vector specific primers. Forward Primer - name:T7-pME18S-FL3-fw, sequence:CGTAATACGACTCACTATAGGGCCTTCTGCTCTAAAAGCTGCG; Reverse Primer - name:T3-pME18S-FL3-rv, sequence:CAAATTAACCCTCACTAAAGGGCGACCTGCAGCTCGAGCAC. Anti-sense probe was then transcribed from the PCR amplified template using T3 polymerase. EMAGE Editor's Note: the partial probe sequence indicated here was given by the EURExpress Consortium and has been checked using BLAST comparison against all available partial insert sequences of IMAGE:1890617 from NCBI. In cases where no BLAST hit was found (because the two sequence reads are found at opposing ends of the insert sequence), both end sequences were then checked against the appropriate cDNA RefSeq to ensure validity of the information.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EMAGE:19751 same embryo
 EMAGE:19749 same embryo
 EMAGE:19750 same embryo
 EMAGE:19752 same embryo
 EurExpress:euxassay_006241 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS