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EMAGE:21303

Lhx4 LIM homeobox protein 4 ( MGI:101776)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:21303 EMAGE:21303 EMAGE:21303 EMAGE:21303 EMAGE:21303
"Pseudo-wholemount" of euxassay_017902. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_017902_01 euxassay_017902_02 euxassay_017902_03 euxassay_017902_04
EMAGE:21303 EMAGE:21303 EMAGE:21303 EMAGE:21303 EMAGE:21303
euxassay_017902_05 euxassay_017902_06 euxassay_017902_07 euxassay_017902_08 euxassay_017902_09
EMAGE:21303 EMAGE:21303 EMAGE:21303 EMAGE:21303 EMAGE:21303
euxassay_017902_10 euxassay_017902_11 euxassay_017902_12 euxassay_017902_13 euxassay_017902_14
EMAGE:21303 EMAGE:21303 EMAGE:21303 EMAGE:21303 EMAGE:21303
euxassay_017902_15 euxassay_017902_16 euxassay_017902_17 euxassay_017902_18 euxassay_017902_19
EMAGE:21303
euxassay_017902_20

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:21303Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
21303_wholemount_strong.wlz
21303_wholemount_moderate.wlz
21303_wholemount_weak.wlz
21303_wholemount_possible.wlz
21303_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:21303_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T50604
Entity Detected:Lhx4, LIM homeobox protein 4 ( MGI:101776)
Sequence:sense strand is shown

>T50604
AGTTCTACAAGAGTGTCAAGAGGAGCCGGGGAGGCAGCAAGCAGGAGAAGGAGAGCTCAGCAGAGGACTG
TGGGGTTAGTGACAGTGAGCTGAGCTTCCGAGAAGATCAAATACTCTCAGAGCTTGGCCACACCAATAGG
ATTTATGGCAACGTGGGGGACGTTACAGGCGGACAGTTAATGAATGGGAGTTTCTCCATGGATGGGACAG
GACAATCCTATCAGGACTTGAGGGATGGGAGCCCTTATGGAATCCCCCAGTCTCCGTCCTCCATATCGTC
CCTCCCATCCCATGCTCCTTTGCTCAATGGGCTGGATTACACCGTGGACAGTAATCTGGGCATCATTGCG
CATGCAGGGCAGGGAGTCAGCCAGACACTGAGAGCCATGGCTGGGGGACCCACCTCTGACCTCTCGACAG
GAAGCAGTGTAGGCTACCCTGATTTTCCAACTAGCCCAGCCTCTTGGCTCGATGAGATGGACCATCCTCC
TTTTTAGACTTTCCTCGTCACCCTCCTTGTCCTCCTGGTATGAGAGAATGTCTTCAAGGATCAAAAGTAC
GCCAATGTGAATTTCCATTATTTTCAATGGAAGTCCTCCGCCGATTCCCAGGAGGCGGAGACCACACTAG
GATACTGCTTTCTTGGGAAGAGACAGGAGAGCAGCCTCATCTCTACCACAGCACAGGGGTGGACAGCCTA
GAACTCTAAGGATGCTGGCTTGTTGGCTCCCTCCCCTCCCGCCCTGCTTAGAGGCTTTGGCTGCTCAGTG
CTTGGACAGCACAAGGTGACTGTGACAGGCCACCTTGGCCTTTGGGGACTCTGCTCCAGCTGGTGCATCT
CACACTTGGTCTCCCAAATCATCCCTCTCACCAGAACCAGGATTCCTGTGGGGGAGGCACCATGGTGTCC
CCCCCCGAATAATAAAATAGTTTCTGGACCACCTTGATTACACACTAA
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:AGTTCTACAAGAGTGTCAAGAGG; Reverse Primer - name:unspecified, sequence:TTAGTGTGTAATCAAGGTGGTCC. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_017902 same experiment
 EMAGE:21302 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS