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EMAGE:217

Epha4 Eph receptor A4 ( MGI:98277)
TS20 (12.5 dpc)
in situ hybridisation

Data Images
EMAGE:217 EMAGE:217
Figure 5O of Nieto et al, 1992 [PMID:1295734] . Copyright: This image is from Development and is displayed with the permission of the Company of Biologists Ltd. who owns the copyright. Figure 5N of Nieto et al, 1992 [PMID:1295734] . Copyright: This image is from Development and is displayed with the permission of the Company of Biologists Ltd. who owns the copyright.

Expression pattern clarity: two stars
Find spatially similar expression patterns: Find spatially similar patterns
Notes:
Corresponding brightfield and darkfield images are shown below. Abbreviations: bt, basal telencephalon; cn, cortical neuroepithelium; d, diencephalon
Expression Pattern Description
Spatial Annotation:
EMAGE:217EMAGE:217Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
3D mapping3D context movie

View mapped 3D expression image EMAGE genex expression entry
Download individual expression domains:
217_voxel_strong_3D_1.wlz
217_voxel_notDetected_3D_1.wlz
(what is wlz format?)
Download all expression domains: EMAGE:217_all_domains.zip
Find spatially similar expression patterns: EMAGE spatially similar patterns
Morphological match to the template: two stars
Text Annotation:
StructureLevelPatternNotes
telencephalon
detected detected
regionalExpression is restricted to the cortical neuroepithelium and the basal telencephalon.
Annotation Validation: EMAGE Editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:MGI:17719
Entity Detected:Epha4, Eph receptor A4 ( MGI:98277)
Sequence:sense strand is shown

>MGI:17719
GAAGACCTATGTGGATCCTCACACTTACGAAGACCCCAACCAGGCTGTACTCAAGTTTACCACCGAGATC
CACCCATCCTGTGTGGCAAGGCAGAAGGTCATTGGAGCAGGAGAGTTTGGAGAGGTCTATAAAGGGACGC
TGAAGGCATCCTCGGGGAAGAAGGAGATACCGGTGGCCATCAAGACACTGAAAGCGGGCTACACTGAGAA
GCAGCGGGTGGACTTCCTGAGCGAGGCCAGCATCATGGGCCAGTTTAGCCACCACAATATCATCCGCCTG
GAGGCGGTGGTCTCTAAATACAAACCCATGATGATTATCACAGAGTACATGGAGAATGGAGCGCTAGACA
AGTTCCTTAGGGAGAAGGATGGTGAGTTCAGCGTACTTCAGTTGGTGGGCATGCTGAGGGGTATCG
nt 1848 - nt 2263 of NM_010139.1
Notes:The probe used in this study by Nieto et al, 1992 [PMID:1295734] is described in that paper and depicted in Fig 1a (as "probe 2")
Chemistry:RNA
Strand:antisense
Label:S35
Specimen
Organism:mouse
Age:12.5 dpc
Theiler Stage:TS20
Mutations:none (wild-type)
Preparation:section
Procedures
Staining procedure:autoradiography
General Information
Authors:Nieto et al, 1992 [PMID:1295734] . Indexed by GXD, Spatially mapped by EMAGE..
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:non-screen
References:[ PMID:1295734] Nieto MA, Gilardi-Hebenstreit P, Charnay P, Wilkinson DG 1992 A receptor protein tyrosine kinase implicated in the segmental patterning of the hindbrain and mesoderm. Development (116):1137-50
Links:MGI:1336972 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceMGI