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EMAGE:21718

Cbfb core binding factor beta ( MGI:99851)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:21718 EMAGE:21718 EMAGE:21718 EMAGE:21718 EMAGE:21718
"Pseudo-wholemount" of euxassay_018251. This image has been made by aligning and collapsing the constitutent sections. Information about the method. euxassay_018251_01 euxassay_018251_02 euxassay_018251_03 euxassay_018251_04
EMAGE:21718 EMAGE:21718 EMAGE:21718 EMAGE:21718 EMAGE:21718
euxassay_018251_05 euxassay_018251_06 euxassay_018251_07 euxassay_018251_08 euxassay_018251_09
EMAGE:21718 EMAGE:21718 EMAGE:21718 EMAGE:21718 EMAGE:21718
euxassay_018251_10 euxassay_018251_11 euxassay_018251_12 euxassay_018251_13 euxassay_018251_14
EMAGE:21718 EMAGE:21718 EMAGE:21718 EMAGE:21718 EMAGE:21718
euxassay_018251_15 euxassay_018251_16 euxassay_018251_17 euxassay_018251_18 euxassay_018251_19
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euxassay_018251_20 euxassay_018251_21 euxassay_018251_22 euxassay_018251_23 euxassay_018251_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: no stars
Find spatially similar wholemount expression patterns: Find spatially similar wholemount patterns
Expression Pattern Description
Spatial Annotation:
EMAGE:21718Annotation colour key:  
strong strong      
gene expression moderate moderate    
gene expression weak weak        
gene expression possible possible    
gene expression not detected not detected
wholemount mapping

Download individual expression domains:
21718_wholemount_strong.wlz
21718_wholemount_moderate.wlz
21718_wholemount_weak.wlz
21718_wholemount_possible.wlz
21718_wholemount_not_detected.wlz
(what is wlz format?)
Download all expression domains: EMAGE:21718_all_domains.zip
Find spatially similar wholemount expression patterns:  EMAGE spatially similar wholemount patterns
Morphological match to the template: two stars
Annotation Validation: spatial mapping by EMAGE editor
Detection Reagent
Type:in situ hybridisation probe
Identifier:T50253
Entity Detected:Cbfb, core binding factor beta ( MGI:99851)
Sequence:sense strand is shown

>T50253
ACTGCAGTTGGTTTCATGGCCTGAGGCAGTGAAGACGTCACCCACTGCCATGGTTTTGCACTATAATGCC
TGCATTTCTAATTTTTAAAATATGTAGCCAGTAATAATTTGAAATTTTTTTCTATGCAAGCTTATCTTGT
TGGCATTATTTTAGTTGTATCGAAAGTATATACTTTCTTCATTTTAACTTAAAAGCTCATGTCATTTAGA
AACAAGATAAGAAATTAAAATTTGTATCAGGGTTGCTTAACATTCTTTTATACTTTCAGACGAGTTGGTT
ATACAGCTTTCCTCCTTAGATAAGGGTTCTTGGTTTTGGTTTGTTTTCTCTACATCATTTCGTGTTTTTG
TATTCTGCACCATTTTACAAATGAAGATGTGTTTGCAGTTATTTTTTCCAGCTATAAACCTAGAATAGAG
CTGTCTGCCACAGCCTCCTAAAACAAACGTTTACAGTTGTTAAAGCCACAGTATCCTTTCAAATGCTGAT
AGTCACCCTATCCCCTTTAGACAAAAATTCACATTAGTATTAAATTTTGTCTCAGACCCTGTTTCAAGGT
ATATCTTGTAATCATGAGTTTGGGTAGAGATGCTCTTCACAGGTGAGAATGCTCTACAGAAATGCCCAAA
GAAGCCACAGACTGGCTTCTGTTTTATTCAGGGATTTTTTTTTTAATCAGTCAGAAAAAGGATACTGGAA
CTTGTTGTATGTAACAGCATATTAAACTGGAGGCAGTGATAAATCAGCTACACAGGTAAATTGTGTTAAA
ATAATGTTTAAGATAGCTGCTTTCATGTGTATTTTGTATTTTGTATTGCATGCTTTTGTAGAAACAAAAT
TGGGTGATGAAGATGAGTCTTAGAAAATGTTCATCTGGGCAGAAGATGCATTTCTCCCATTGATTCCG
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. Forward Primer - name:unspecified, sequence:ACTGCAGTTGGTTTCAT; Reverse Primer - name:unspecified, sequence:CGGAATCAATGGGAGAAATG. The reverse primer contains a 5' extension containing an unspecified RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template using unspecified polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_018251 same experiment
 EMAGE:21720 same embryo
 EMAGE:21721 same embryo
 EMAGE:21719 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS