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EMAGE:29367

Sirt6 sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae) ( MGI:1354161)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:29367
euxassay_006827_01

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7918
Entity Detected:Sirt6, sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae) ( MGI:1354161)
Sequence:sense strand is shown

>T7918
CGTGCGGCAGCGCCGGCGACGATGTCGGTGAATTATGCAGCAGGGTTGTCGCCTTACGCGGATAAGGGCA
AGTGCGGGCTGCCCGAGATCTTCGACCCACCAGAGGAGCTGGAACGCAAGGTGTGGGAGCTGGCCCGGCT
AATGTGGCAGTCCTCCAGCGTGGTTTTCCACACGGGCGCCGGCATCAGCACCGCCTCTGGCATCCCCGAC
TTCAGAGGCCCCCATGGCGTGTGGACCATGGAGGAACGCGGCCTGGCCCCCAAGTTTGACACCACCTTCG
AGAATGCTCGGCCCTCGAAGACCCACATGGCCCTGGTTCAGCTAGAACGCATGGGCTTCCTCAGCTTCCT
GGTCAGCCAGAACGTAGACGGGCTGCACGTGCGCTCGGGCTTCCCCAGGGACAAGCTGGCAGAGCTGCAC
GGAAACATGTTTGTAGAGGAATGTCCCAAGTGTAAGACGCAGTACGTCAGAGACACGGTTGTGGGCACCA
TGGGCCTCAAGGCCACAGGCCGGCTCTGCACCGTGGCCAAGACCAGGGGACTTCGGGCCTGTAGAGGGGA
GCTGAGAGACACCATTCTGGACTGGGAGGACTCGTTGCCTGACCGGGACCTGATGCTCGCTGATGAGGCC
AGCAGGACCGCAGACCTGTCTGTCACCCTGGGTACCTCGCTGCAGATCCGCCCCAGTGGGAACCTGCCCC
TTGCCACTAAGCGCCGAGGAGGCCGTCTGGTCATTGTCAACCTGCAACCCACAAAACATGACCGCCAGGC
TGACCTGCGCATCCACGGCTACGTGGATGAGGTGATGTGCAGACTCATGAAGCATCTGGGGCTGGAGATT
CCAGCCTGGGATGGACCCTGCGTGCTAGACAAAGCCCTGCCACCTCTGCCTCGCCCAGTAGCACTCAAGG
CTGAGCCCCCCGTGCATCTCAATGGTGCAGTGCATGTTTCGTATAAGTCCAAGCCCAACAGCCCTATACT
CCACAGGCCCCCCAAAAGAGTGAAGACCGAGGCTGCCCCCAGCTGACCCGGGTATGTGGGGCGGGAGGGG
AACTTGAAGGAACCACACATGTTGAGGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTATATTCTGGGG
ACTGAGCCCAGGTTTGCATATCTCACCCTGGTGTCTTTTCAGATTTTTTTTTTTTTTTTTTTTTTTTTTG
AGACCAGGACTCCCTAGATCGCTCAGGCTGGTCTGGAACTCACTGCTATAGCCCAGGCTGGCCTGGAACT
AGCCTGCCTGCCTCAGCCTCTACTGTAGTAGGGACAGCGGGCAGGTACACCATGTCCAACACAGCTCCTT
TCTTCAAAGTCTCACTGTGTCCCTTGTCCAGGTCCTTCCAGGGAATCTCAGGGCATGGGGAATCCCACAC
ATGTGGAAGAGGCCGTGTCCCAGGGATCCACGTGCCTCTCTACCAATCACACCCGCTCGTGACTCAGGAT
GTGCCCGGAGCAGCAGTCTCACACACTCCACACACCATTGCTGCCCCCTGCACGCATCTCCCCCCCATCC
CCTGGCCCTGACACAGAGCCACCAAGGGCCCACCAGGCACCCATCTGTGCTAAGGGCCCCAGGCTCCCAG
AAGCTCCCAATGCAATAAATACAAAATCCCTTCCATTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AA
Notes:The probe template was PCR amplified from IMAGE:6513375 using vector (pCMV-SPORT6.1) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6513375 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_006827 same experiment
 EMAGE:31161 same embryo
 EMAGE:29382 same embryo
 EMAGE:31404 same embryo
 EMAGE:31205 same embryo
 EMAGE:31467 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS