EMAGE mouse gene expression spatial database

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EMAGE:29468

Slc9a1 solute carrier family 9 (sodium/hydrogen exchanger), member 1 ( MGI:102462)
TS23 (14.5 dpc)
in situ hybridisation

Data Images


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View assay images:
Expression pattern clarity:

Expression Pattern Description

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	T56063
Entity Detected:	Slc9a1, solute carrier family 9 (sodium/hydrogen exchanger), member 1 ( MGI:102462)
Sequence:	sense strand is shown >T56063 CGCTCCTCTTGTCTCCTGACCTGGATTGGCTCTGCCCCCTTCCTCCGCATGGCAGCTGGGCCCACAGCCC CCACTGCAGCACGGCTTGCCCCTGCCTCCTGGGAAGGGTCCTCTCCTACAGAACTGCCTTCCCAATCCAT CCATTTGGCGGATGGCTGGGCTGCTGAGGCAGGCCCCGCCCCATCTCTAGATCCAGGCTCTCCCATAGTG GAACCAGGGCTCCTCAAGGCCCTCCTTCCCTCCAGCCCCTCCTCATCCAGACCAACTCTCCATCCTTGAT CATCATTTCTAACCAAAGAGCCACTGGCTCCACTGTGGTCCCAGCAGGAAAGGAGGGAGCTGAGCCTTCC GTGGCCGTGACTGGGCCCCTGTATCAGAGGACAGCAGGCCTGTGGCTGGGAAGCAGACCCGTGACCCATA GTAGAGCTGCCCACGGCAGCGCCACGGTTCTCCCGCTAGCCTCGGTGCTCTGGCCGCCACCCGAGCTGTC CTTACTCAGAGCTGCGGGCTGAGGGCGTCTCTGAGCTTCTCTGCTGGGCGCTGGGGCACATTCAACAGAG ACGTGATTGGGGTGATGAGGACCACTGGGCCTTAGTGGGGCTTACACGGGAGGGACTGTCCGAGGCTCTG GAAAGTGTCCTCTTCTTACACTTGGCTTATTTGCACCTCACTGTAAGTATGATTCTGTTTGCACAGAGGC ACTCTTGTTTTCAGACCCTTTGAGTCCCCCATGCCAGTCAGAGCTCTGCCCTTTCCCCACCTTCCCTTAA ATGGAACCTCTGCTGCTGGGGGCCCTTGCCCACAGCACCGATTCTGATGTGGCCCAACCTGTCATGACTC AAGCTCACCAGCAGGGGGCCTCCCGGTACCTCCCTTGCTCTTGGGCCTGCTTTTACTTCTGTTGGCCAGT TCTACCACCACCCCTTATCTGGACCACTCTCTTTCCTGCATTCTGTAGAGTAGAAAGTACTGGACCCCCC TAGAGGCCTTTGCTCACAGGCACACACTCCCTAC
Notes:	The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. .
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Strain:	C57BL/6
Age:	14.5 dpc
Theiler Stage:	TS23
Mutations:	none (wild-type)
Preparation:	section

Procedures

Fixation:	none
Embedding:	cryosection (OCT)
Staining procedure:	alkaline phosphatase + NBT/BCIP

General Information

Authors:	Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:	Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	screen
References:	[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:	EurExpress:euxassay_019740 same experiment
	EMAGE:13481 same embryo
	EMAGE:13482 same embryo
	EMAGE:13483 same embryo
	Ensembl same gene
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source