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EMAGE:29930

Gpc6 glypican 6 ( MGI:1346322)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:29930 EMAGE:29930 EMAGE:29930 EMAGE:29930 EMAGE:29930
euxassay_002120_01 euxassay_002120_02 euxassay_002120_03 euxassay_002120_04 euxassay_002120_05
EMAGE:29930 EMAGE:29930 EMAGE:29930 EMAGE:29930 EMAGE:29930
euxassay_002120_06 euxassay_002120_07 euxassay_002120_08 euxassay_002120_09 euxassay_002120_10
EMAGE:29930 EMAGE:29930 EMAGE:29930 EMAGE:29930 EMAGE:29930
euxassay_002120_11 euxassay_002120_12 euxassay_002120_13 euxassay_002120_14 euxassay_002120_15
EMAGE:29930 EMAGE:29930 EMAGE:29930 EMAGE:29930
euxassay_002120_16 euxassay_002120_17 euxassay_002120_18 euxassay_002120_19

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4641
Entity Detected:Gpc6, glypican 6 ( MGI:1346322)
Sequence:sense strand is shown

>T4641
TGAAGAGCGCACAGGGAGCTGGGGGCTGCCGAGGTGGACTTGCATGTTGCACCATGCCTTCTTGGATCCG
GGCTGTGATTCTTCCTCTCTCCGGGCTGCTGCTGACCCTCCCGGCCGCGGCGGACGTGAAGGCTCGGAGC
TGCAGCGAGGTCCGTCAGGCTTACGGTGCCAAGGGATTCAGCCTGGCGGACATCCCCTACCAGGAGATCG
CAGGGGAGCACTTACGCATCTGCCCTCAGGAATATACCTGCTGCACCACAGAAATGGAAGACAAGCTGAG
TCAACAGAGTAAACTGGAGTTTGAAAACCTTGTAGAAGAGACAAGCCACTTTGTGAGGACCACGTTTGTG
TCGAGGCACAAGAAATTTGATGAGTTTTTCCGAGAGCTGCTGGAAAACGCAGAAAAGTCCCTAAATGACA
TGTTTGTCCGGACCTACGGGATGCTGTACATGCAGAATTCAGAGGTATTCCAGGACCTCTTCACTGAGCT
AAAGCGGTACTACACAGGGGGTAACGTCAACCTGGAAGAGATGCTCAATGACTTCTGGGCTCGGCTCCTG
GAGAGGATGTTCCAGCTGATTAACCCTCAGTATCACTTCAGCGAGGACTACCTGGAGTGTGTAAGCAAGT
ACACAGACCAGCTGAAGCCATTTGGAGACGTGCCACGGAAACTGAAGATTCAGGTCACCCGCGCCTTCAT
CGCGGCTCGCACCTTTGTCCAGGGCCTGACAGTGGGCAGAGAGGTTGCCAACCGAGTTTCCAAGGTGAGC
CCCACCCCTGGCTGCATCCGGGCTCTCATGAAGATGCTGTACTGCCCATACTGCCGAGGCTTGCCCACTG
TGAGACCTTGCAACAACTACTGCCTCAACGTCATGAAGGGCTGCCTGGCCAATCAGGCAGATTTGGACAC
TGAGTGGAATCTCTTCATAGATGCAATGCTCTTGGTGGCTGAGCGACTGGAAGGGCCATTCAACATTGAG
TCAGTCATGGACCCAATAGACGTCAAGATCTCTGAAGCCATTATGAACATGCAGGAAAACAGCATGCAGG
TGTCAGCAAAGGTCTTTCAGGGCTGTGGCCAGCCCAAACCTGCTCCCGCTCTCAGATCTGCTCGCTCAGC
TCCAGAAAATTTTAACACCCGTTTTCGGCCCTACAACCCTGAGGAAAGACCCACAACTGCAGCGGGCACG
AGCTTGGACCGGCTGAGGACTGTGTGGAGGACCATGCAGCACAGTGTCACAGACATAAAAGAGAAGCTGA
AGCTCTCTAAAAAGGTCTGGTCAGCATTGCCCTACACCATCTGCAAGGACGAACGTGTGACAGCAGGAAC
CTCCAACGAGGAGGAGTGCTGGAACGGACACAGCAAAGCCAGATACCTGCCTGAGATCATGAACGATGGG
CTGACCAACCAAATCAACAATCCTGAGGTGGAGGTGGACATCACACGGCCAGACACTTTCATCAGACAGC
AGATCATGGCTCTCCGTGTGATGACCAACAAACTGAAGAATGCGTACAATGGCAATGACGTCAACTTCCA
AGACACAAGCGATGAATCCAGTGGCTCAGGCAGCGGCAGTGGTTGCATGGATGATGTGTGTCCCACGGAG
TTCGAGTTTGTCACCACCGAGGCCCCGGCGGTGGACCCGGACCGCAGAGAAGAGGAATCTTCGGCCTCGA
AGTTCAGCTCCTCCTTGATTTCCTGGTCTCTGGTCTGCATGGTCTTGGCCCTGCAGAGACTCTACAGATA
ATCGTGGGCTTTGGTCAGACGAAACTGCGTTTTAGCTCTTCTGTGGCCAACACCCTTCTTTTCTTACACT
CTTGAACAATGGACCATGCCACACAACAAGCCGTTTTCTATGACAAGAGAGCAGTCTTGAGGTCTGCCTC
CCCTTTTTGCTTTCCCAAAGAGTACCGGGTGCCAGATGGCTTGCTTCTCTTTCCGTCAGCTATCTGTGGG
GACCTCGTTTATTCCAGAGAGAATTCTTACTCAAACCTTTCGTACCAAGAGATTGTTTTCTTACCGTCGT
TTGCTTTTATGCTGCAAAATTAAAAGAATTTCATGTTGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5008374 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5008374 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_002120 same experiment
 EMAGE:29916 same embryo
 EMAGE:32213 same embryo
 EMAGE:29921 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS