EMAGE mouse gene expression spatial database

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EMAGE:30477

Ctnnbl1 catenin, beta like 1 ( MGI:1913892)
TS23 (14.5 dpc)
in situ hybridisation

Data Images


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View assay images:
Expression pattern clarity:

Expression Pattern Description

Detection Reagent

Type:	in situ hybridisation probe
Identifier:	T9695
Entity Detected:	Ctnnbl1, catenin, beta like 1 ( MGI:1913892)
Sequence:	sense strand is shown >T9695 GCTTTACGGCAGTGTGTCAGGAAAAGCCTCTGAGCGGCCCGTGGTTCGGGAGTTGAGTGGAGGCAACCAG GGTACCCTGTGCTGATTGGGTCCGGAACCATGGACGTGGGCGAACTTTTAAGCTACCAGCCCAACAGGGG CACAAAACGACCCCGGGATGATGAGGAAGAAGAACTGAAGACACGCCGCAAGCAAACTGGTCCTCGAGAA CGCGGCCGCTATCGCGAAGAGGAGGCCACGGCAGCCGAAGACACAGCTGATGACAAGAAAAGGCTGCTGC AGATTATTGACAGGGATGGCGAGGAAGAAGAGGAGGAGGAGGAGCCGCTGGATGAAAGCTCAGTGAAGAA GATGATTCTCACATTTGAGAAGCGATCCTACAAAAACCAGGAGCTGCGGATCAAGTTTCCAGACAATCCG GAGAAGTTCATGGAATCCGAGCTGGACCTCAATGACATCATTCAGGAGATGCACGTGGTGGCCACCATGC CTGACCTGTACCACCTTCTCGTGGAGCTGAGTGCCGTGCAGTCACTTCTCTGCTTGCTGGGACATGATAA TACAGATGTGTCCATAGCTGTGGTCGATCTCCTCCAGGAGCTGACAGACATAGACACCCTCCACGAGAGT GAAGAAGGAGCAGAAGTTCTCATCGACGCCCTGGTGGACGGGCAGGTGGCCGCATTGTTGGTGCAGAATC TGGAGCGCCTGGATGAGTCTGTGAGGGAGGAGGCTGATGGCGTCCACAACACCCTAGCTATTGTGGAGAA TATGGCCGAGTTCCGTCCGGAGATGTGCACAGAGGCTGCCCAGCAGGGACTCCTGCAGTGGCTGTTGAAG AGGCTGAAGGCCAAGATGCCCTTCGATGCCAACAAGCTGTACTGTAGTGAAGTGCTGGCCATCCTCCTCC AGGACAATGACGAAAACAGGGAATTGCTGGGAGAGCTGGATGGCATTGACGTGCTTCTTCAGCAGTTATC CGTATTTAAAAGACACAACCCCAGCACCGCTGAGGAGCAGGAAATGATGGAGAACCTGTTCGATGCGCTC TGTTCCTGCTTAATGCTCAGCTCCAATCGAGAGCGCTTCCTGAAGGGCGAGGGGCTGCAGCTCATGAACC TCATGCTCAGGGAGAAGAAGGTCTCCCGGAGCAGCGCCCTGAAGGTGCTGGACCATGCCATGATTGGGCC TGAAGGCACAGACAACTGCCACAAGTTTGTTGACATTCTTGGCTTACGGACCATCTTTCCACTCTTCATG AAGTCTCCTCGGAAAATCAAGAAGGTGGGAACCACAGAGAAGGAGCATGAAGAGCATGTCTGTTCGATCC TGGCTTCCCTCCTGCGCAACCTGAGAGGGCAGCAGCGGACCCGGCTTCTGAATAAATTTACGGAGAACGA CAGTGAGAAGGTTGACAGACTAATGGAGCTGCATTTTAAATATCTCAGCGCAATGCAGGTGGCCGACAAG AAGATTGAAGGGGAGAAACATGACATAGTGCGGCGTGGGGAGATCATAGACAATGACATGGAGGACGAGT TCTACCTGCGGCGCCTGGATGCCGGGCTCTTCATCCTACAGCACATCTGTTACATCATGGCGGAGATCTG CAATGCCAATGTCCCCCAGATTCGCCAGCGGGTTCACCAGATCCTGAACATGCGTGGCAGCTCCATCAAG ATCGTCAGGCACATCATCAAGGAGTACGCAGAGAACATTGGAGATGGCCGGAGCCCTGAGTTCCGGGAGA CCGAGCAGAAGCGCATCCTGGCCTTGTTGGAGAACTTCTAGAATGCTAGGGAGAGCGTGACGGCCACCGA CCCCTGGCTCCCTCCTGGAAACCATTTTTACAGTTGTATGGCTTGAACAAATTAAAGCTAGTTTTGGCAA AAAAAAAAAAAAAAAAAAAAAAAAAAAA
Notes:	The probe template was PCR amplified from IMAGE:6705648 using vector (pDNR-LIB) specific primers. Forward Primer - name:M13 forward (-21), sequence:TGTAAAACGACGGCCAGT; Reverse Primer - name:T3-pDNR-LIB rv, sequence:CAAATTAACCCTCACTAAAGGGTGTTCACTTACCTACTGGGC. Anti-sense probe was then transcribed from the PCR amplified template usi. T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:6705648 which was retrieved directly from NCBI.
Chemistry:	RNA
Strand:	antisense
Label:	digoxigenin

Specimen

Organism:	mouse
Strain:	C57BL/6
Age:	14.5 dpc
Theiler Stage:	TS23
Mutations:	none (wild-type)
Preparation:	section

Procedures

Fixation:	none
Embedding:	cryosection (OCT)
Staining procedure:	alkaline phosphatase + NBT/BCIP

General Information

Authors:	Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:	Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:	EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:	screen
References:	[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:	EurExpress:euxassay_006346 same experiment
	EMAGE:31529 same embryo
	EMAGE:30120 same embryo
	EMAGE:31591 same embryo
	EMAGE:30480 same embryo
	EMAGE:29565 same embryo
	Allen Brain Atlas same gene
	BioGPS same gene
	International Mouse Knockout Project Status same gene
	GEISHA Chicken ISH Database same gene
	EMBL-EBI Gene Expression Atlas same gene
	BrainStars same gene
	ViBrism same gene
Data Source