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EMAGE:30886

E130309D02Rik ( MGI:2442621)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:30886 EMAGE:30886 EMAGE:30886 EMAGE:30886 EMAGE:30886
euxassay_005147_01 euxassay_005147_02 euxassay_005147_03 euxassay_005147_04 euxassay_005147_05
EMAGE:30886 EMAGE:30886 EMAGE:30886 EMAGE:30886 EMAGE:30886
euxassay_005147_06 euxassay_005147_07 euxassay_005147_08 euxassay_005147_09 euxassay_005147_10
EMAGE:30886 EMAGE:30886 EMAGE:30886 EMAGE:30886 EMAGE:30886
euxassay_005147_11 euxassay_005147_12 euxassay_005147_13 euxassay_005147_14 euxassay_005147_15
EMAGE:30886 EMAGE:30886 EMAGE:30886 EMAGE:30886 EMAGE:30886
euxassay_005147_16 euxassay_005147_17 euxassay_005147_18 euxassay_005147_19 euxassay_005147_20
EMAGE:30886 EMAGE:30886 EMAGE:30886 EMAGE:30886
euxassay_005147_21 euxassay_005147_22 euxassay_005147_23 euxassay_005147_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
vestibulocochlear viii ganglion
moderate moderate
regionalmoderate expression: see section 06 07 08 17 18 19 20
stomach
weak weak
regionalweak expression: see section 03 04 05 06 07 08 09 10
metanephros
moderate moderate
regionalmoderate expression: see section 07 08 09 10 11 16 17 18 19 20 not examined expression: see section 12
cervico-thoracic ganglion
moderate moderate
regionalmoderate expression: see section 11 18
spinal cord
moderate moderate
regionalmoderate expression: see section 10 11 12 13 14 15 16 17
brain
moderate moderate
regionalmoderate expression: see section 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22
glossopharyngeal ix ganglion
moderate moderate
regionalmoderate expression: see section 07 08 18 19
thoracic ganglion
moderate moderate
regionalmoderate expression: see section 12 13
retina
moderate moderate
regionalmoderate expression: see section 01 02 03
midgut
moderate moderate
regionalmoderate expression: see section 13 14 15 16 weak expression: see section 11 12
thyroid gland
weak weak
regionalweak expression: see section 12 13 16
dorsal root ganglion
moderate moderate
regionalmoderate expression: see section 10 12 18 19 weak expression: see section 11 17
adenohypophysis
moderate moderate
regionalmoderate expression: see section 10 11 12 13 14 15
lower jaw molar
moderate moderate
regionalmoderate expression: see section 06 07 19 20
submandibular gland primordium
moderate moderate
regionalmoderate expression: see section 07 08 09 10 17 18 19 20
upper jaw molar
moderate moderate
regionalmoderate expression: see section 06 07 19 20
thymus primordium
moderate moderate
regionalmoderate expression: see section 12 13 14 15 16
trigeminal v ganglion
moderate moderate
regionalmoderate expression: see section 03 04 05 06 07 08 17 18 19 20 21
nasal cavity olfactory epithelium
moderate moderate
regionalmoderate expression: see section 07 08 09 10 11 13 14 15 16 17
cervical ganglion
moderate moderate
regionalmoderate expression: see section 09 18
liver
moderate moderate
regionalmoderate expression: see section 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21
lower jaw incisor
moderate moderate
regionalmoderate expression: see section 11 12 13 16 17
upper jaw incisor
moderate moderate
regionalmoderate expression: see section 11 12 15 16
lung
moderate moderate
regionalmoderate expression: see section 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T8607
Entity Detected:E130309D02Rik, ( MGI:2442621)
Sequence:sense strand is shown

>T8607
GGCGGCGCCGCAGTCGGACCCCAGGATACTCGCTGGCCCGTGGCGGCGGCGGCAGCGGCGACGATGGTCC
CCTGAGCGGGTTGGCGCCTGTTAGAGGCGGGCGGGCGCCGCGACCCTGCCCGCGTCGGGGCCCAGGCCGG
TCGCGCCTCTTTGTCTCCGGGCGGAAGTAGGACTCGCGGCGGGGACAGGGCGGCCGCACCATGAGCGACA
TCCGCCACTCGCTGCTGCGGCGCGACGCGCTGAGCGCCGCCAAGGAGGTGCTGTACCACCTGGACATCTA
CTTCAGCAGCCAGCTGCAGAGCGCGCCGTTGCCCATCGTGGACAAGGGCTCCGTGGAGCTGCTGGAGGAG
TTCGTGTTCCAAGTGCCCAAGGAGCGCGGCGCGCAGCCCAAGAGACTGAATTCCCTCCAGGAGCTCCAGC
TTCTTGAAATCATGTGCAGTTACTTCCAGGAGCAAAGCAAGGACTCTGTGCGGCAGATCATTTTCTCCTC
CCTTTTCAGCCCCCAAGGGAACAAAGCCGACGACAGCCGAATGAGCTTGTTGGGAAAGCTGGTCTCCATG
GCCGTGGCCGTGTGTCGGATCCCCGTGTTGGAATGTGCGGCCTCCTGGCTCCAGCGGACGCCCGTGGTCT
ACTGCGTGAGGCTTGCCAGAGTGCTTGTGGAGGACTACTGCTGTCTGGTGCCGGGCTCCGTTCAGACACT
GAAGCAGATCTTTAGTGCCAGTCCTCGTTTCTGCTGCCAGTTCATAACGTCCGTGACCGCCCTCTACGAC
CTGTCATCAGATGACCTCATCCCACCTTTGGACTTGCTTGAAATGATTGTCAGCTGGATTTTCGAGGACC
CGAGGCTGATTCTCATCACATTTTTAAATACTCCCATCGCCGCCAACCTGCCCATAGGATTTTTAGAGCT
CACACCCCTCATTGGGCTGATCCGGTGGTGCGTGAAGGCCCCTCTGGCTTACAAAAGGAAGAAGCCTTGC
CTATCCAATGGCCACATCAGTCACAAGGTTGCCAAGGACTCGGGTGCCAGCACGGACAGAGACTCGCACT
TGCTGTACTCAAAGCTCCACCTGAGCGTCCTGCAGGTCCTCATGACGCTCCAGCTGCACCTCACAGAGAA
AAACCTGTACGGGCGCCTGGGGCTCATCCTGTTCGACCACATGGTCCCGCTTGTGGAGGAGATCAACAGA
CTAGCAGATGAACTGAACCCCCTCAATGCCTCCCAGGAGATCGAGCTTGCCCTGGACCGCTTGGCCCAGG
CCTTGCAGGTGGCTATGACGTCGGGGGCCCTGCTGTGCACGAGAGATGACCTGAGAACCTTGTGCTCCCG
GCTGCCCCATAACAACCTGCTCCAGCTGGTGATCTCGGGCCCAGTGCAGCAGTCGCCACACACCGCTCTT
CCCCCTGGGTTCTACCCGCATATCCATACTCCCCCGCTGGCCTATGGGGCTGTGCCAGCGCACCCAGCTG
CCCACCCAGCCCTGCCTACGCACCCAGGGCACACCTTCATCTCAGGTGTGACCTTCCCGTTCAGGCCCAT
CCGCTAGGCTGGCCCTTCCAAGCCAAGCCGCCAAGCGGCTGTGTGCCTTGCTCCCAGACCAAGGAAGCCC
TTGGAGAGAGGGATGCTGGCCCCGTGGACAAGGACCCTGGGAGGCAGCAGGTGGTCCTTCCAGCTGGCAG
AACCATCTTGGTACTGATGTCCCAAGTTGCTGTTTCCGGGGTGCCTCCTACCTGGTCATATTAAATATCC
AGATTGGATGATGAAAGCGAGTGGGCTCCACCCTCTGCAGAGAGCACTGTGGGTGTTTTTAGATATGCCA
GTCTGTGAGTGACAGTTGTCACACACAGACACTCTCAGCTCGCCACCAGGGTGTGCTGGTGGGTAAGCCG
GTGCCTGCGGGTCCATTTGCCCTGCCTCAGGAATGTGAAGTGTCTCTGCCACCAACAGCGTTTTCTGCAG
CTCCATGAGCTCAGAGTGCAGAGGGTGAGACCCAGCTCGTACGCAGTACTGGGCACAGCTCAGGGACACC
TGTTGGGATTCCCCATCACCTTGGAGAGGATCTGTGTCTTATGGGGGGTGGGGAGGCGGGTATCTAAATT
TTCCTTTCATGTGTTCAAAATAAATTTTTCTAAACAGTTAAAAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:5716912 using vector (pYX-Asc) specific primers. Forward Primer - name:RZ. T3, sequence:ATTAACCCTCACTAAAGGGA; Reverse Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG. Anti-sense probe was then transcribed from the PCR amplified template usi. T7 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5716912 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_005147 same experiment
 EMAGE:30844 same embryo
 EMAGE:30809 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS