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EMAGE:31042

Gap43 growth associated protein 43 ( MGI:95639)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31042 EMAGE:31042 EMAGE:31042 EMAGE:31042 EMAGE:31042
euxassay_002973_01 euxassay_002973_02 euxassay_002973_03 euxassay_002973_04 euxassay_002973_05
EMAGE:31042 EMAGE:31042 EMAGE:31042 EMAGE:31042 EMAGE:31042
euxassay_002973_06 euxassay_002973_07 euxassay_002973_08 euxassay_002973_09 euxassay_002973_10
EMAGE:31042 EMAGE:31042 EMAGE:31042 EMAGE:31042 EMAGE:31042
euxassay_002973_11 euxassay_002973_12 euxassay_002973_13 euxassay_002973_14 euxassay_002973_15
EMAGE:31042 EMAGE:31042 EMAGE:31042 EMAGE:31042 EMAGE:31042
euxassay_002973_16 euxassay_002973_17 euxassay_002973_18 euxassay_002973_19 euxassay_002973_20
EMAGE:31042 EMAGE:31042 EMAGE:31042
euxassay_002973_21 euxassay_002973_22 euxassay_002973_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
vestibulocochlear viii ganglion
moderate moderate
regionalmoderate expression: see section 06 07 08 16 17 18
stomach
moderate moderate
regionalmoderate expression: see section 01 02 03 04 05 06 07 08 09 10
cervico-thoracic ganglion
moderate moderate
regionalmoderate expression: see section 10 15
rectum
moderate moderate
regionalmoderate expression: see section 11 12
glossopharyngeal ix ganglion
moderate moderate
regionalmoderate expression: see section 07 08 17 18
thoracic ganglion
moderate moderate
regionalmoderate expression: see section 11 12
midgut
moderate moderate
regionalmoderate expression: see section 06 07 08 09 10 11 12 13 14 15 16 17
dorsal root ganglion
moderate moderate
regionalmoderate expression: see section 08 09 10 14 15 16 17
facial vii ganglion
moderate moderate
regionalmoderate expression: see section 05 06 07 18 19 20
trigeminal v ganglion
moderate moderate
regionalmoderate expression: see section 03 04 05 06 07 08 16 17 18 19 20 21
nasal cavity olfactory epithelium
weak weak
regionalweak expression: see section 07 08 09 10 13 14 15 16
hindgut
moderate moderate
regionalmoderate expression: see section 11 12 13 14 15
cervical ganglion
moderate moderate
regionalmoderate expression: see section 09 16
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4263
Entity Detected:Gap43, growth associated protein 43 ( MGI:95639)
Sequence:sense strand is shown

>T4263
AGAGGGAGGGAGAGGGAGGGAGGGAGGGAGAGCGCGCTAGCGCGAGAGAGCGAGTGAGCAAGCGAGCAGA
AAAGAGGTGGAGAGGGGGGGAATAAGGAAGAGAGGAGGAAAGGAGAGAAGGCAGGAAGAAGGCAGGGGAA
GATACCACCATGCTGTGCTGTATGAGAAGAACCAAACAGGTTGAAAAGAATGATGAGGACCAAAAGATTG
AACAAGATGGTGTCAAGCCGGAAGATAAGGCTCATAAGGCTGCGACCAAAATTCAGGCTAGCTTCCGTGG
ACACATAACAAGGAAAAAGCTCAAAGGCGAGAAGAAGGGTGATGCACCAGCTGCTGAGGCCGAGGCCAAG
GAGAAGGATGATGCTCCCGTTGCTGATGGTGTGGAGAAGAAGGAGGGAGATGGCTCTGCTACTACCGATG
CAGCCCCAGCCACCAGCCCCAAGGCTGAGGAGCCCAGCAAGGCAGGAGATGCACCTTCTGAGGAGAAGAA
GGGTGAAGGGGATGCGGCCCCCTCCGAGGAAAAGGCCGGCTCAGCGGAGACAGAAAGTGCTGCTAAAGCT
ACCACTGATAACTCCCCGTCCTCCAAGGCTGAAGATGGCCCAGCCAAGGAGGAGCCTAAACAAGCCGATG
TGCCTGCTGCTGTCACTGATGCTGCTGCCACCACCCCTGCTGCAGAGGATGCTGCCACCAAGGCAGCGCA
GCCTCCAACGGAGACTGCAGAAAGCAGCCAAGCTGAGGAGGAGAAAGACGCTGTAGACGAAGCCAAACCT
AAGGAAAGTGCCCGACAGGATGAGGGTAAAGAAGACCCCGAGGCTGACCAAGAACATGCCTGAACTTTAA
GAAATGGCTTTCCACGTTGCCCCCACCTGAACCCTGTCTCTCCTGCCCTTCTCAGCTCCACTCTGAAGTT
TCCTCTCCTGTCCTGCTCACGTGTGTGAGCCTGTCCTCTCCTACCTATGAGCCCTCTCTCTCTGTGTGGC
AAACATTTAAAGAAAAAAAAAAAGCAGGAAAGATCCCAAGTCCAACAGTGTGGCTTAAACATTTGTTTCT
TGGTGTTGTTATGGCGAGTTTTTGGTAATGATGATGCAGTCATCTTGGGAAATTCTTGCACTGTACCCCG
GTTTTTTGATCTGGTGCGTGTGGCCCTGTGGGAGTCCACTTTCCTCTCTATTTCTCTCTGTTCCAAGTGT
GTGTGTGCAATGTTCCGTTCTGAGGAGTCCAAAATATTAAGTGAATTCAAAAACCATTTCTGTTTCCTCA
TTTTCAATGTGATGGAATGAACAAAAAGGTTAAAAAATTAAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4503501 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4503501 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_002973 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS