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EMAGE:31061

Ywhah tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide ( MGI:109194)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31061 EMAGE:31061 EMAGE:31061 EMAGE:31061 EMAGE:31061
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euxassay_007180_11 euxassay_007180_12 euxassay_007180_13 euxassay_007180_14 euxassay_007180_15
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View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
dorsal root ganglion
strong strong
regionalstrong expression: see section 06 07 12 13 14 15 16
facial vii ganglion
strong strong
regionalstrong expression: see section 05 19 20
vagus x ganglion
strong strong
regionalstrong expression: see section 06 15 16
trigeminal v ganglion
strong strong
regionalstrong expression: see section 02 03 04 05 06 07 14 15 16 17 18 19 20
cervical ganglion
strong strong
regionalstrong expression: see section 06 07 14 15
vestibulocochlear viii ganglion
strong strong
regionalstrong expression: see section 04 05 06 07 15 16 17 18
cervico-thoracic ganglion
strong strong
regionalstrong expression: see section 07 12 13
glossopharyngeal ix ganglion
strong strong
regionalstrong expression: see section 05 06 16 17
trigeminal v nerve
strong strong
regionalstrong expression: see section 07
thoracic ganglion
strong strong
regionalstrong expression: see section 09 10 11
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T50023
Entity Detected:Ywhah, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide ( MGI:109194)
Sequence:sense strand is shown

>T50023
GAGCGAGCGAGTGAGCAGGCGGTGTGGGCGTGCGAGGCGAGGCCGAGTCGCGAGCGACATGGGGGATCGA
GAGCAGCTGCTGCAGCGGGCGCGACTGGCGGACGAGGCGGAGCGCTACGACGATATGGCCTCCGCCATGA
AGGCGGTGACAGAGCTGAATGAACCACTATCTAACGAAGATCGAAATCTCCTCTCTGTGGCCTACAAGAA
TGTAGTTGGTGCCAGGCGATCTTCTTGGAGGGTTATTAGTAGCATTGAGCAGAAAACCATGGCAGATGGG
AATGAGAAGAAGTTGGAGAAAGTTAAAGCCTACCGGGAGAAGATTGAAAAGGAGCTGGAGACAGTTTGCA
ATGATGTCTTGGCTCTGCTTGACAAGTTCCTTATCAAGAACTGCAATGATTTTCAGTATGAGAGCAAGGT
GTTCTACCTGAAAATGAAGGGCGATTACTACCGCTACCTGGCAGAGGTGGCTTCTGGGGAGAAGAAAAAC
AGTGTGGTTGAAGCTTCTGAGGCCGCGTATAAGGAAGCCTTCGAAATCAGCAAAGAGCACATGCAGCCAA
CACACCCCATCCGGCTTGGCCTGGCCCTCAATTTTTCTGTGTTCTACTATGAGATCCAGAATGCACCAGA
GCAAGCCTGCCTCTTAGCCAAACAAGCCTTCGATGATGCTATAGCTGAGCTGGACACATTAAACGAGGAT
TCCTATAAGGACTCCACTCTCATCATGCAGTTGCTGCGAGACAACCTCACCCTCTGGACGAGCGACCAGC
AGGATGAAGAAGCAGGAGAAGGCAACTGAAGACCCTTCAGGTCCCTGGCTCTTCCTTCACCCACCACCCC
CATTATCACTGATTCTTCCTTGCCACAATCACTATATCTAGTGCTAAACCTATCTGTATTGGCAGCACAG
CTATTCAGATCTGCCCTCCTGTCCCTTGGGAAGCAGTTTCAGA
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers.. The reverse primer contains a 5' extension containing . T7 RNA polymerase binding site (this extension is not shown in the primer sequence listed here). Anti-sense probe was transcribed from the PCR amplified template usi. T7 polymerase.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:NMRI
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_007180 same experiment
 EMAGE:29188 same embryo
 EMAGE:29321 same embryo
 EMAGE:29433 same embryo
 EMAGE:29304 same embryo
 EMAGE:29190 same embryo
 EMAGE:29316 same embryo
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS