Quicksearch Help

(Click the icon to keep this page displayed.)

EMAGE:31280

Slc26a7 ( MGI:2384791)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31280 EMAGE:31280 EMAGE:31280 EMAGE:31280 EMAGE:31280
euxassay_013787_01 euxassay_013787_02 euxassay_013787_03 euxassay_013787_04 euxassay_013787_05
EMAGE:31280 EMAGE:31280 EMAGE:31280 EMAGE:31280 EMAGE:31280
euxassay_013787_06 euxassay_013787_07 euxassay_013787_08 euxassay_013787_09 euxassay_013787_10
EMAGE:31280 EMAGE:31280 EMAGE:31280 EMAGE:31280 EMAGE:31280
euxassay_013787_11 euxassay_013787_12 euxassay_013787_13 euxassay_013787_14 euxassay_013787_15
EMAGE:31280 EMAGE:31280 EMAGE:31280 EMAGE:31280 EMAGE:31280
euxassay_013787_16 euxassay_013787_17 euxassay_013787_18 euxassay_013787_19 euxassay_013787_20
EMAGE:31280 EMAGE:31280
euxassay_013787_21 euxassay_013787_22

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
pituitary gland
weak weak
regionalweak expression: see section 09 10 11 12 13 14
metanephros
strong strong
regionalstrong expression: see section 07 08 09 15 16 17 moderate expression: see section 18
male reproductive system
strong strong
regionalstrong expression: see section 10 14
tarsus
strong strong
regionalstrong expression: see section 01 02 04 21 22
nose
strong strong
regionalstrong expression: see section 08 09 10 11 14 15 16 17
interdigital region between hindlimb digits 1 and 2
strong strong
regionalstrong expression: see section 02 21 22
axial musculature
strong strong
regionalstrong expression: see section 03 04 16 17 moderate expression: see section 02 18 19
otic capsule
strong strong
regionalstrong expression: see section 05 06 07 08 14 15 16 17
pancreas
moderate moderate
regionalmoderate expression: see section 09 10 weak expression: see section 15 16
lower jaw molar
moderate moderate
regionalmoderate expression: see section 16
thymus primordium
strong strong
regionalstrong expression: see section 11 12 13 moderate expression: see section 09 10
lower leg rest of mesenchyme
strong strong
regionalstrong expression: see section 01 02 03
vibrissa
strong strong
regionalstrong expression: see section 06 07 08 21 22 moderate expression: see section 05 weak expression: see section 09
telencephalon ventricular layer
moderate moderate
regionalmoderate expression: see section 01 02 03 04 05 06 07 08 16 17 18 19 20 21 weak expression: see section 09 10 11 15 22
upper lip
strong strong
regionalstrong expression: see section 09 10 11 12 13 14 15 16 17 18 19 moderate expression: see section 20
midbrain mantle layer
moderate moderate
single cellmoderate expression: see section 05 06 15 16 weak expression: see section 07 14
orbito-sphenoid
strong strong
regionalstrong expression: see section 01 02 03 04 05 21 22
lower lip
strong strong
regionalstrong expression: see section 08 09 10 11 17 18 19 moderate expression: see section 16 20 weak expression: see section 13 14 15
mandible
strong strong
regionalstrong expression: see section 04 05 moderate expression: see section 02 03 06 10 17 18 20 21 weak expression: see section 19
interdigital region between hindlimb digits 4 and 5
strong strong
regionalstrong expression: see section 02 03 21 22
extrinsic ocular muscle
strong strong
regionalstrong expression: see section 02 03 04 05 06 07 19 20 21 22
cricoid cartilage
strong strong
regionalstrong expression: see section 09 11 12
inner ear vestibular component
strong strong
regionalstrong expression: see section 02 03 04 18 19
olfactory cortex mantle layer
strong strong
single cellstrong expression: see section 15 16 moderate expression: see section 11 12
thyroid cartilage
strong strong
regionalstrong expression: see section 09 10 11 12
interdigital region between hindlimb digits 3 and 4
strong strong
regionalstrong expression: see section 02 03 20 21 22
pleural cavity
weak weak
regionalweak expression: see section 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21
forearm rest of mesenchyme
strong strong
regionalstrong expression: see section 01
thyroid gland
strong strong
regionalstrong expression: see section 09 13 moderate expression: see section 12
hand mesenchyme
strong strong
regionalstrong expression: see section 01 02
interdigital region between hindlimb digits 2 and 3
strong strong
regionalstrong expression: see section 02 21 22
aorta
moderate moderate
regionalmoderate expression: see section 07 08 09 10 11 12
maxilla
strong strong
regionalstrong expression: see section 04 moderate expression: see section 02 03 06 10 17 18 20 21 weak expression: see section 19
manubrium sterni
strong strong
regionalstrong expression: see section 10 11 12 13
diencephalon lateral wall mantle layer
strong strong
single cellstrong expression: see section 10 11
lower jaw incisor
strong strong
regionalstrong expression: see section 11 17 moderate expression: see section 15 weak expression: see section 14
upper jaw incisor
strong strong
regionalstrong expression: see section 11 12 16 17 moderate expression: see section 15
glans of male genital tubercle
strong strong
regionalstrong expression: see section 10 11 12 13 14 15 16
diencephalon lateral wall ventricular layer
moderate moderate
regionalmoderate expression: see section 13 weak expression: see section 10 11 12
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T7142
Entity Detected:Slc26a7, ( MGI:2384791)
Sequence:sense strand is shown

>T7142
ATTACTTTTCCAAGTTCAGAAAAGTATTACATGAACAGAAACCATTCCTTATTCAGATAAGAATTTAAGA
AGTTGACTACTACAGGAGGGAATCTGAAAATCTGAAAAAATGACGGGAGCAAAGAGGAAAAAGAGAAGCG
TGCTGTGGGGCAAGATGCACACCCCCCACCGAGAAGACATTAAGCAGTGGTGTAAGAGGCGCCTACCTAT
CTTGGAATGGGCACCGCAGTACAATCTGAAGGAAAACCTGCTTCCAGACACTGTGTCTGGGATAATGTTG
GCAGTTCAACAGGTGGCACAAGGGCTGTCCTTCGCTATGCTTTCATCTGTACACCCAGTTTTTGGTTTAT
ATGGATCTCTGTTTCCAGCCATCATTTATGCTATATTTGGAATGGGGCGCCATGTTGCCACAGGCACCTT
TGCCTTGACATCCTTGATATCAGCCAACGCTGTGGAACGACTGGTCCCTCAGAGCAGCAGGAACCTCACC
ACACAGAGCAACTCAAGTGTGTTGGGCTTATCCGAGTTTGAGCTGCAGAGAATCGGGGTTGCAGCGGCTG
TTTCTTTCTTGGGTGGAGTGATTCAGCTGGTCATGTTTGTGCTGCAGCTGGGCAGTGCCACATTCCTGCT
TACAGAGCCTGTGATCAGCGCCATGACCACAGGGGCCGCCACCCATGTCGTGACATCACAAGTCAAGTAT
CTCTTGGGAATCAAAATGCCATATATATCCGGACCACTGGGATTCTTTTATATTTATGCGTATGTCTTTG
AGAACATCAAGTCTGTCCAGCTGGAAGCACTGCTCTTATCTTTGCTGAGCATCATTGTCCTTGTTCTCGT
TAAAGAGCTGAATGAACAGTTTAAAAGAAAAATTAAAGTTGTTCTTCCTGTCGACTTAGTTTTGATCATT
GCCGCCTCATTTGCTTGCTATTGTACCAACATGGAAAACACATACGGATTAGAAGTAGTTGGGCACATTC
CAAACGGGATTCCTCCTCCCCGTGCTCCCCCAATGAACATCCTCTCTGCAGTGCTCACTGAAGCTTTCGG
AGTTGCACTTGTAGGCTATGTGGCCTCGCTGGCTCTCGCACAAGGATCTGCCAAGAAGTTCAAATATTCA
GTTGATGACAACCAGGAATTTTTGGCCCATGGCCTCAGCAACGTGATCCCTTCATTTCTCTTCTGCATCC
CAAGCGCTGCCGCCATGGGAAGGACGGCTGGTTTGTACAGCACCGGCGCAAAGACGCAGGTGGCTTGTCT
AATATCTTGCATTTTCGTCCTTATTGTCATCTATGCAATAGGACCTCTGCTGTACTGGCTGCCCATGTGC
GTTCTTGCAAGTATTATTGTTGTGGGCCTGAAGGGAATGTTAATACAGTTCCGGGATTTAAAAAAATACT
GGAATGTGGATAAAATCGATTGGGGCATATGGATCAGTACTTACATTTTTACAATATGCTTTGCTGCCAA
TGTGGGATTGTTGTTTGGTGTTATCTGCACCATAGCTATCGTGTTAGGACGTTTCCCAAGGGCAAAGACT
TTAAGCATAACAGACATGAAAGAAATGGAATTGAAGGTGAAGACAGAAATGCATGATGAAACCTCGCAAC
AGATAAAAATCATCTCAATAAACAATCCACTTGTTTTCCTGAATGCAAAGAAATTTAGTGCTGATTTGAT
GAAAATAATCCTAAAGGAAAGTGACAGCAACCAACCACTTGATGATGTCAGCAAGTGTGAACAGAACACC
TTGCTCAGTTCCCTGTCCAACGGCAACTGCAATGAAGAGGCTTCCCAGCCCTGCTCCAGCGAGAAGTGTT
CTTTGGTCCTGAATTGCAGTGGCTTGACCTTTTTTGACTACACAGGAGTCTCCACGCTTGTTGAGCTCTA
CCTTGATTGCAAGAGCAGGAGTGTGGATGTGTTCTTAGCCAACTGTACTGCATCCTTGATAAAAGCAATG
ACATACTATGGAGACCTAGACACCGAAAAACCAATTTTTTTTGACTCGGTACCTGCTGCGATAACTATCA
TCCAATCAAATAAGAATTTGAGCAAGGCCAGTGACCACAGTGAAGTCTGAGACCCATGTGTTGAAGTGCA
CGCCTCATCTTTAGCAGCTGCCCCAAAGAGGCCAGATCCTGGCATTTTGCACACATTTTGGTGTATATAC
AGTGTATCACTCAGTATGAATGATATGACTTGGCAACTGCATAGCCACTGGCCAAGACTTGCTGACCTTC
TATTTTTTCTAATTTTCCTTAATAAACAGATTCATTTAGTTATTTCATATAGGCATCAATATGCATTTAG
CTTTAGTTTACTGAACAGTAAACATGCTTTTATTTCTTGCAAAAAAAAAAAAAAAA
Notes:The probe template was PCR amplified from IMAGE:4020760 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:4020760 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_013787 same experiment
 EMAGE:31282 same embryo
 EMAGE:30305 same embryo
 EMAGE:31284 same embryo
 EMAGE:31283 same embryo
 EMAGE:31277 same embryo
 EMAGE:31303 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS