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EMAGE:31356

Ciapin1 cytokine induced apoptosis inhibitor 1 ( MGI:1922083)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31356 EMAGE:31356 EMAGE:31356 EMAGE:31356 EMAGE:31356
euxassay_003162_01 euxassay_003162_02 euxassay_003162_03 euxassay_003162_04 euxassay_003162_05
EMAGE:31356 EMAGE:31356 EMAGE:31356 EMAGE:31356 EMAGE:31356
euxassay_003162_06 euxassay_003162_07 euxassay_003162_08 euxassay_003162_09 euxassay_003162_10
EMAGE:31356 EMAGE:31356 EMAGE:31356 EMAGE:31356 EMAGE:31356
euxassay_003162_11 euxassay_003162_12 euxassay_003162_13 euxassay_003162_14 euxassay_003162_15
EMAGE:31356 EMAGE:31356 EMAGE:31356 EMAGE:31356 EMAGE:31356
euxassay_003162_16 euxassay_003162_17 euxassay_003162_18 euxassay_003162_19 euxassay_003162_20
EMAGE:31356 EMAGE:31356 EMAGE:31356
euxassay_003162_21 euxassay_003162_22 euxassay_003162_23

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
neural retina
moderate moderate
regionalmoderate expression: see section 01 02 03
vestibulocochlear viii ganglion
moderate moderate
regionalmoderate expression: see section 07 18 19
cervico-thoracic ganglion
moderate moderate
regionalmoderate expression: see section 10 11 17
glossopharyngeal ix ganglion
moderate moderate
regionalmoderate expression: see section 07 19
thoracic ganglion
moderate moderate
regionalmoderate expression: see section 13 14 15
dorsal root ganglion
strong strong
regionalstrong expression: see section 08 09 10 11 12 16 17 18
facial vii ganglion
moderate moderate
regionalmoderate expression: see section 04 05 21 22
not examined not examined
regionalnot examined expression: see section 01 02 03
lower jaw molar
weak weak
regionalweak expression: see section 07 08 19 20
submandibular gland primordium
moderate moderate
regionalmoderate expression: see section 07 08 09 10 17 18 19 20
vagus x ganglion
moderate moderate
regionalmoderate expression: see section 08 18
upper jaw molar
weak weak
regionalweak expression: see section 07 08 19 20
trigeminal v ganglion
moderate moderate
regionalmoderate expression: see section 03 04 05 06 07 08 09 18 19 20 21 22 23
nasal cavity olfactory epithelium
weak weak
regionalweak expression: see section 08 09 10 11 12 13 15 16 17 18 19
cervical ganglion
moderate moderate
regionalmoderate expression: see section 09 17
lower jaw incisor
weak weak
regionalweak expression: see section 11 12 14 15 16 17
upper jaw incisor
weak weak
regionalweak expression: see section 11 12 15 16 17
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T4923
Entity Detected:Ciapin1, cytokine induced apoptosis inhibitor 1 ( MGI:1922083)
Sequence:sense strand is shown

>T4923
GCGGAGCGGGTTTTCAGGCTACGAGGAAGTACCATTTAGGTCCAGCAGCGCGGCAGGAATGGAGGAGTTT
GGGATCTCCCCTGGCCAGCTTGTGGCAGTGTTCTGGGACAAGTCATCTCCTGAGGAAGCCCTAAAAAAGC
TGGTGGCTAGACTGCAAGAGTTAACTGGCAGCGAGGGCCAGGTATTCATGGAAAACGTCACCCAGCTGTT
GCAGTCTTCGCATAAGGAATCCAGCTTCGATGTCATTCTGTCGGGTGTAGTCCCAGGAAGCACCTCTCTG
CACAGTGCTGAGGTTCTGGCTGAGATGGCCCGGATCCTCCGGCCAGGGGGCTGTCTTTTTCTGAAAGAAC
CAGTGGAGACAGCTGAAGTTAACAATGACAAAATGAAGACGGCCTCTAAGCTATGTTCAGCCCTGACTCT
TTCTGGCCTCGTGGAAATAAAAGAGTTGCAGAGGGAGGCCTTAAGCCCTGAGGAGGTACAGTCCGTGCAG
GAGCACCTGGGCTACCACAGTGACAGCCTGCGCTCAGTCCGTGTCACTGGCAAGAAGCCAAACTTTGAAG
TGGGTTCTTCTAGCCAGCTAAAGCTTCCCAACAAGAAGTCTTCTTCAGTGAAGCCTGTTGTGGATCCTGC
TGCTGCCAAGCTCTGGACCCTCTCAGCAAATGACATGGAGGATGACAGTGTGGATCTCATTGACTCAGAC
GAGCTGCTTGATCCAGAGGATTTGAAGAGGCCTGACCCAGCCTCCCTGAAGGCTCCTTCATGTGGGGAAG
GGAAAAAGAGGAAGGCCTGTAAGAACTGCACCTGTGGCCTCGCAGAGGAACTGGAGCGGGAGCAGTCCAA
GGCGCAGAGCTCTCAGCCCAAGTCAGCCTGTGGAAATTGCTACCTGGGTGACGCTTTCCGCTGTGCCAAC
TGCCCCTACCTCGGGATGCCAGCCTTCAAGCCTGGCGAGCAGGTGCTCCTGAGCAATAGCAATCTCCAGG
ATGCCTAGGAGGGACCTCAAGCCCACACACCTCCTCCTCCAGCAACTCCTGTCCTCAGCTCCTCCCACGG
CCTCCTCCCACCTCTGGTTTCAGGCGCTCTGAAAACACTCACAGGGAGAGGCTTGCAGCCGAGCGAGCGA
GCGAAGCTGCTGTGGGCAGTGGGGTGGGGTGCTGCTGTGTCTTGAAAGACCAAGGATTGAGGGGACCTGT
CTCTTAGTGTTAGGGGAAGAGGGTGGATGCGCCTAAGGAACTCTGCTCCTGGTGTTACAGTGCTGTCCCT
CTCTACCCTTGAGTATTTATGCTGAGTAAGCTCCAGGCTCCGCTCAGTGATGCTGCCACCTGCTGGACTT
CCTCAGGATGTAGTTCTTGGAGCCATGGGTTAGCTGTCAAAGGGCCTCAGGGGCACCAAAGAAGTCACTC
CCCCAGTTGTGATCCATCTTGTGTCCCTCTGCCTTTCTCACCTCACCCCGTTTTACTGTAGTGTTGTATC
TGTGTCCTGTTGTCATTTCTGTTAAATGGTATTAAACTTTTGTGTTTTTATGTCTCCCTTTAAAAAAAAA
AAAAAA
Notes:The probe template was PCR amplified from IMAGE:5123958 using vector (pCMV-SPORT6) specific primers. Forward Primer - name:RZ. T7, sequence:TAATACGACTCACTATAGGG; Reverse Primer - name:RZPD sp6, sequence:ATTTAGGTGACACTATAG. Anti-sense probe was then transcribed from the PCR amplified template using Sp6 polymerase. EMAGE Editor's Note: the probe sequence indicated here was given by the EURExpress Consortium and has been checked using a computational method whereby a BLAST comparison was made against the full insert sequence of IMAGE:5123958 which was retrieved directly from NCBI.
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_003162 same experiment
  Ensembl same gene
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS