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EMAGE:31386

Slc13a4 ( MGI:2442367)
TS23 (14.5 dpc)
in situ hybridisation

Data Images
EMAGE:31386 EMAGE:31386 EMAGE:31386 EMAGE:31386 EMAGE:31386
euxassay_019711_01 euxassay_019711_02 euxassay_019711_03 euxassay_019711_04 euxassay_019711_05
EMAGE:31386 EMAGE:31386 EMAGE:31386 EMAGE:31386 EMAGE:31386
euxassay_019711_06 euxassay_019711_07 euxassay_019711_08 euxassay_019711_09 euxassay_019711_10
EMAGE:31386 EMAGE:31386 EMAGE:31386 EMAGE:31386 EMAGE:31386
euxassay_019711_11 euxassay_019711_12 euxassay_019711_13 euxassay_019711_14 euxassay_019711_15
EMAGE:31386 EMAGE:31386 EMAGE:31386 EMAGE:31386 EMAGE:31386
euxassay_019711_16 euxassay_019711_17 euxassay_019711_18 euxassay_019711_19 euxassay_019711_20
EMAGE:31386 EMAGE:31386 EMAGE:31386 EMAGE:31386
euxassay_019711_21 euxassay_019711_22 euxassay_019711_23 euxassay_019711_24

View assay images: EMAGE genex expression entry
Expression pattern clarity: one star
Expression Pattern Description
Text Annotation:
StructureLevelPatternNotes
metencephalon part of 4th ventricle choroid plexus
moderate moderate
regionalmoderate expression: see section 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23 weak expression: see section 24
lateral ventricle choroid plexus
moderate moderate
regionalmoderate expression: see section 05 06 07 08 09 10 12 13 14 15 16 17 weak expression: see section 18 19 20
lung
moderate moderate
regionalmoderate expression: see section 08 09 12 19 20 24 weak expression: see section 07 10 11 13 14 16 17 18 21 22 23
urethra of male
weak weak
regionalweak expression: see section 12 13
Annotation Validation: text annotation by author
Detection Reagent
Type:in situ hybridisation probe
Identifier:T56032
Entity Detected:Slc13a4, ( MGI:2442367)
Sequence:sense strand is shown

>T56032
TGTCAATCTCCTTCGCTGTGATGCTGCCCGTGGGCAACCCCCCCAACGCCATCGTCTTCAGCTACGGGCA
CTGCCAGATCAAAGACATGGTGAAAGCCGGTCTGGGAGTCAATGTCATCGGTCTGGTGATCGTGATGGTG
GCCATCAATACTTGGGGAGTTAGCCTCTTCCACTTGGATGCTTTCCCAGCCTGGGCTAAGGTCAGCAACA
TCACTGATCAGACCTAACGCGAGCGGACAGTTACCAAGCACAGCCAGAGCTAAGCCTTGGGCCGAGAAAA
CCACCAGAAGCATAAACCCCAGACCCACATGGAGGCTATTCCCGCCGCCAGATCCCGCCAACCGCCACCG
GGCGCATTGGCTGTGTCTCCCTCCCAGCCTGCCTGCTTTTCTTACCACCAACTCTCAAGAAAGCCTACAG
CTGCTCTCTCTTCCTGTGTCCAGCTCTCTCTTTTTGAAGACCAGAAAACACTGTAAGCCTTGGTGCCCTG
AGAGGAAACCTCACAAACTGACCGGCATCACTAGGTTTTGTGTCACCTTCCTAGGAATCAGAGCTAGCCA
GAGCACTCTGCCTGTCAGACCATGAGACCTGTGACCTCTCTTCTGGGAGAAAACCTCACCCATGTTCTCA
AGCATTTCTGTCCTATCTCTAGAAAAGGTAACCTGTCTCTCTTCAGTGGTCCCCCTACCTCGGCACCAAA
TTCCTGAAAAGAAATAATATTCTCCTTCAGAAGGAGGCTGGCCTGATTCCACCAAAGGAAAGAGATGGAA
ACAAACCAACCAACCATCCTGAGGTCAGCTTCTCTATGCACTGTCATTAACAGGAGATTCTATTGTGTTG
TGTGTGGTGAGAGGAAAAAGGTTCATACCTGTCTTATTAGGAAGACCACAACTACAATTAAGACCACAGT
ATTAACTGATATTACATCTACTTCTCCATTTAATAACTAGCTTGTTTCTGAGAAAACCAAGTTCTAAGTG
GTACCCAAAGGTGTTGCCAGTCCTT
Notes:The probe template was PCR amplified from E14.5 mouse embryo cDNA using gene specific primers. .
Chemistry:RNA
Strand:antisense
Label:digoxigenin
Specimen
Organism:mouse
Strain:C57BL/6
Age:14.5 dpc
Theiler Stage:TS23
Mutations:none (wild-type)
Preparation:section
Procedures
Fixation:none
Embedding:cryosection (OCT)
Staining procedure:alkaline phosphatase + NBT/BCIP
General Information
Authors:Dr. Graciana Diez-Roux, Prof. Gregor Eichele, Prof. Richard Baldock, Dr. Duncan Davidson, Prof. Stylianos Antonarakis, Dr. Marie Laure Yaspo, Prof. Salvador Martinez Perez, Dr. Pascal Dolle, Dr. David Tannahill, Prof. Pier Paolo Di Fiore, Mr. Stefan Kruse, Mr. Paolo Sarmientos, Dr. Uwe Radelof, Prof. Andrea Ballabio.
Principal investigator:Professor Andrea Ballabio, Fondazione Telethon, TIGEM Instituto di Genetica e Medicina, Via Pietro Castellino 111 80131, Napoli, Italy 80131
Submitted by:EMAGE EDITOR, Institute of Genetics and Molecular Medicine, Western General Hospital, Crewe Road, Edinburgh, UK EH4 2XU
Experiment type:screen
References:[ doi:10.1371/journal.pbio.1000582] [ PMID:21267068] Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, et al 2011 A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo PLoS Biol (9)
Links:EurExpress:euxassay_019711 same experiment
 EMAGE:10072 same embryo
  Allen Brain Atlas same gene
  BioGPS same gene
  International Mouse Knockout Project Status same gene
  GEISHA Chicken ISH Database same gene
  EMBL-EBI Gene Expression Atlas same gene
  BrainStars same gene
  ViBrism same gene
Data SourceEUREXPRESS